Jatropha Genome Database

JcCA0059601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0059601.10 + phase: 0 /partial
         (295 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01027587001 assembled CDS                                       440   e-124
GSVIVT01019879001 assembled CDS                                       439   e-124
GSVIVT01023350001 assembled CDS                                       330   4e-91
GSVIVT01008734001 assembled CDS                                       325   2e-89
GSVIVT01005195001 assembled CDS                                       264   5e-71
GSVIVT01035853001 assembled CDS                                       241   2e-64
GSVIVT01016876001 assembled CDS                                       219   8e-58
GSVIVT01015542001 assembled CDS                                       159   2e-39
GSVIVT01015543001 assembled CDS                                       127   5e-30
GSVIVT01035095001 assembled CDS                                        52   4e-07

>GSVIVT01027587001 assembled CDS
          Length = 940

 Score =  440 bits (1131), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 202/267 (75%), Positives = 229/267 (85%)

Query: 4   VGCPREPWHDLHSKIDGPAAYDILTNFEERWSKASKPHGLQKLKASHDDALLRIERIPEI 63
            GCPREPWHD+H KIDGPAAYD+LTNF+ERW KA+KPHG++KLK S+DDALL+IERIP+I
Sbjct: 517 AGCPREPWHDMHCKIDGPAAYDVLTNFQERWLKAAKPHGIKKLKMSYDDALLKIERIPDI 576

Query: 64  LGIAEASSQADNDPESWHTQVFRSIDSNSVKGFPDDPKDAPSRNLLCGKNVLIDTSIHTA 123
           LGI++A    +NDPE+WH QVFRSIDSNSVKGFP D +DA  +NL+CGKNVLID SIHTA
Sbjct: 577 LGISDAPCLGENDPEAWHVQVFRSIDSNSVKGFPKDSRDALQKNLVCGKNVLIDMSIHTA 636

Query: 124 YVKAIRAAQHFIYIENQYFLGSSYNWDSNKDLGANNLIPMEIALKIANKIRANERFSAYI 183
           YVKAIRAAQHFIYIENQYF+GSS+NW S K+LGA+N+IPMEIALKIANKIRANERF+AYI
Sbjct: 637 YVKAIRAAQHFIYIENQYFIGSSFNWTSYKNLGADNIIPMEIALKIANKIRANERFAAYI 696

Query: 184 LIPMWPEGVPTSAPTQRILFWQQKTMQMMYDTIYKALVEVGLENTYEPQDYLNFFCLGNR 243
           ++PMWPEGVPT A TQRILFWQ KTMQMMY+TIYKALVEVGLE  + PQDYLNFFCLGNR
Sbjct: 697 VVPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEEAFTPQDYLNFFCLGNR 756

Query: 244 EAFDRENSLNAQSVNGANTPQVSFSSN 270
           EA D   +    S   ANTPQ     N
Sbjct: 757 EAVDGSETPGTTSPTAANTPQAHSRKN 783


>GSVIVT01019879001 assembled CDS
          Length = 839

 Score =  439 bits (1129), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/290 (72%), Positives = 241/290 (83%), Gaps = 4/290 (1%)

Query: 4   VGCPREPWHDLHSKIDGPAAYDILTNFEERWSKASKPHGLQKLKAS-HDDALLRIERIPE 62
            GCPREPWHD+H +IDGPAAYDILTNFEERW KASKP GLQKLKAS +DDALL++ERI +
Sbjct: 417 TGCPREPWHDMHCRIDGPAAYDILTNFEERWLKASKPRGLQKLKASSYDDALLKLERISD 476

Query: 63  ILGIAEASSQADNDPESWHTQVFRSIDSNSVKGFPDDPKDAPSRNLLCGKNVLIDTSIHT 122
           I+G+A+AS   +NDPE+WH QVFRSIDS SV+GFP +PK+A S+NL+CGKN+LID SIHT
Sbjct: 477 IIGMADASCPNENDPEAWHVQVFRSIDSTSVEGFPKEPKEATSKNLVCGKNILIDMSIHT 536

Query: 123 AYVKAIRAAQHFIYIENQYFLGSSYNWDSNKDLGANNLIPMEIALKIANKIRANERFSAY 182
           AYVKAIRAAQHFIYIENQYFLGSSYNW S KDLGANNLIPMEIALKIANKIRA ERFSAY
Sbjct: 537 AYVKAIRAAQHFIYIENQYFLGSSYNWASYKDLGANNLIPMEIALKIANKIRAKERFSAY 596

Query: 183 ILIPMWPEGVPTSAPTQRILFWQQKTMQMMYDTIYKALVEVGLENTYEPQDYLNFFCLGN 242
           I+IPMWPEGVPTS PTQRILFWQ KTMQMMY+ +YKAL EVGLEN Y PQDYLNFFCLGN
Sbjct: 597 IVIPMWPEGVPTSTPTQRILFWQHKTMQMMYEMVYKALQEVGLENQYHPQDYLNFFCLGN 656

Query: 243 REAFDRENSLNAQSVNGANTPQVSFSSNYHVFPISIQCFFFLFSPDYLQI 292
           RE  +  ++ NA + + ANTPQ + +     F I +     +   +YL I
Sbjct: 657 RE--EGVDTSNAGNQSAANTPQ-ALARKSRRFMIYVHSKGMIVDDEYLII 703


>GSVIVT01023350001 assembled CDS
          Length = 842

 Score =  330 bits (847), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 162/296 (54%), Positives = 210/296 (70%), Gaps = 12/296 (4%)

Query: 7   PREPWHDLHSKIDGPAAYDILTNFEERWSKASK--PHGLQKLKASHDDALLRIERIPEIL 64
           PR+PWHDLH K++GPAAYDI+TNFE+RW KA+K     L+K+   H+DAL+R++RI  I+
Sbjct: 413 PRQPWHDLHCKVEGPAAYDIMTNFEQRWRKAAKWRDFRLKKVTHWHEDALIRLDRISWII 472

Query: 65  -------GIAEASSQADNDPESWHTQVFRSIDSNSVKGFPDDPKDAPSRNLLCGKNVLID 117
                  G        + DPE+WH QVFRSIDS SV+GFP   +DA ++NL+CGKN+ ID
Sbjct: 473 TPSSGPTGDHAVRVTTEEDPETWHVQVFRSIDSGSVRGFPKLVQDAEAQNLVCGKNLKID 532

Query: 118 TSIHTAYVKAIRAAQHFIYIENQYFLGSSYNWDSNKDL-GANNLIPMEIALKIANKIRAN 176
            SIH AYVKAIR+AQHFIYIENQYFLGS+Y+W S K+  GA+NLIPME+ALKI++KI AN
Sbjct: 533 RSIHAAYVKAIRSAQHFIYIENQYFLGSAYHWPSYKNAAGADNLIPMELALKISSKISAN 592

Query: 177 ERFSAYILIPMWPEGVPTSAPTQRILFWQQKTMQMMYDTIYKALVEVGLENTYEPQDYLN 236
           E F  YI++PMWPEGVPTSA  Q ILFWQ +TM MMY  I +A+ + GL +T+ PQDYLN
Sbjct: 593 EHFRVYIVVPMWPEGVPTSASVQEILFWQGQTMSMMYQIIGQAIHKAGLSDTHHPQDYLN 652

Query: 237 FFCLGNREAFDRENSLNAQSVNGANTPQVSFSSNYHVFPISIQCFFFLFSPDYLQI 292
           F+CLG REA   E+S  AQ+ N +    +  +  +  F I +     +   +Y+ I
Sbjct: 653 FYCLGKREASSTESS--AQTSNSSENRALGLAQKFRRFMIYVHAKGMIVDDEYVLI 706


>GSVIVT01008734001 assembled CDS
          Length = 823

 Score =  325 bits (832), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 163/297 (54%), Positives = 211/297 (71%), Gaps = 19/297 (6%)

Query: 7   PREPWHDLHSKIDGPAAYDILTNFEERWSKASK----PHGLQKLKASHDDALLRIERIPE 62
           PR+PWHDLH KI+GPAAYD+LTNFE+RW KA+K        +++   H+DAL+++ERI  
Sbjct: 395 PRQPWHDLHCKIEGPAAYDVLTNFEQRWRKATKWSEFGRRFKRITHWHEDALIKLERISW 454

Query: 63  ILGIAEASSQAD--------NDPESWHTQVFRSIDSNSVKGFPDDPKDAPSRNLLCGKNV 114
           IL  + +    D        NDPE+WH QVFRSIDS S++GFP D   A ++NL+C KN+
Sbjct: 455 ILSPSPSVPYDDPSLWVSEENDPENWHVQVFRSIDSGSLRGFPKDVPSAEAQNLVCAKNL 514

Query: 115 LIDTSIHTAYVKAIRAAQHFIYIENQYFLGSSYNWDSNKDLGANNLIPMEIALKIANKIR 174
           +ID SI TAY++AIR+AQHFIYIENQYF+GSSY W S K+ GA+NLIPME+ALKIA+KIR
Sbjct: 515 VIDKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPSYKNAGADNLIPMELALKIASKIR 574

Query: 175 ANERFSAYILIPMWPEGVPTSAPTQRILFWQQKTMQMMYDTIYKALVEVGLENTYEPQDY 234
           A ERFS Y++IPMWPEG P+ A  Q ILFWQ +TMQMMYD I + L  + LE+ + PQDY
Sbjct: 575 AKERFSVYVVIPMWPEGNPSCASVQEILFWQGQTMQMMYDIIAQELQSMQLEDAH-PQDY 633

Query: 235 LNFFCLGNREAFDRE-NSLNAQSVNGANTPQVSFSSNYHVFPISIQCFFFLFSPDYL 290
           LNF+CLGNRE   +E +S N Q+ +G     VS S  +H F I +     +   +Y+
Sbjct: 634 LNFYCLGNREEPPKEVSSSNTQASDG-----VSTSKKFHRFMIYVHAKGMIVDDEYV 685


>GSVIVT01005195001 assembled CDS
          Length = 1607

 Score =  264 bits (674), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 131/223 (58%), Positives = 158/223 (70%), Gaps = 20/223 (8%)

Query: 3    GVGCPREPWHDLHSKIDGPAAYDILTNFEERWSKASK----PHGLQKLKASHDDALLRIE 58
            G   PR+PWHDLH KI+GPAAYD+L NFE+RW KA+K       L+K+   HDDAL++I+
Sbjct: 1086 GSKAPRQPWHDLHCKIEGPAAYDVLINFEQRWKKATKWTEFGLHLKKISHWHDDALIKID 1145

Query: 59   RIPEILGIAEASSQAD----------------NDPESWHTQVFRSIDSNSVKGFPDDPKD 102
            RI  IL     S   D                +DPE+WH QVFRSIDS S+KGFP     
Sbjct: 1146 RISWILSPPSGSDGDDVTSVPKDDPSLWVTKEDDPENWHVQVFRSIDSGSLKGFPKTVDT 1205

Query: 103  APSRNLLCGKNVLIDTSIHTAYVKAIRAAQHFIYIENQYFLGSSYNWDSNKDLGANNLIP 162
            A ++NL+C KN++ID SI TAY++AIR+AQHFIYIENQYFLGSSY W S KD GA+NLIP
Sbjct: 1206 AENQNLICAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKDAGADNLIP 1265

Query: 163  MEIALKIANKIRANERFSAYILIPMWPEGVPTSAPTQRILFWQ 205
            ME+ALKIA+KI+A ERF+ YI+IPMWPEG P S   Q ILFWQ
Sbjct: 1266 MELALKIASKIKAKERFAVYIVIPMWPEGDPKSNTVQEILFWQ 1308



 Score =  136 bits (343), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 72/136 (52%), Positives = 90/136 (66%), Gaps = 2/136 (1%)

Query: 155  LGANNLIPMEIALKIANKIRANERFSAYILIPMWPEGVPTSAPTQRILFWQQKTMQMMYD 214
            L A+NLIPME+ALKIA+KIRA ERF+ YI+IPMWPEG P S   Q ILFWQ +TMQMMY+
Sbjct: 1335 LRADNLIPMELALKIASKIRAKERFAVYIVIPMWPEGDPKSNTVQEILFWQAQTMQMMYE 1394

Query: 215  TIYKALVEVGLENTYEPQDYLNFFCLGNREAFDRENSLNAQSVNGANTPQVSFSSNYHVF 274
             I K L  + LE+++ P DYLNF+CLGNRE   +E S  A S   AN   V  S+ +  F
Sbjct: 1395 VIAKELKSMQLEDSH-PLDYLNFYCLGNREGVTKEMSEKA-SPTPANADAVLASAKFRRF 1452

Query: 275  PISIQCFFFLFSPDYL 290
             I +     +   +YL
Sbjct: 1453 MIYVHAKGMIVDDEYL 1468


>GSVIVT01035853001 assembled CDS
          Length = 752

 Score =  241 bits (616), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 120/245 (48%), Positives = 161/245 (65%), Gaps = 19/245 (7%)

Query: 5   GCPREPWHDLHSKIDGPAAYDILTNFEERWSKASKPHGLQKLKASHDDALLRIERIPEIL 64
           G PREPWHD+H +++G  A+D+L NFE+RW K     GL  L         ++E+I    
Sbjct: 339 GGPREPWHDIHCRLEGAVAWDVLYNFEQRWRKQVGEDGLFPLS--------KLEQIT--- 387

Query: 65  GIAEASSQADNDPESWHTQVFRSIDSNSVK-GFPDDPKDAPSRNLLCGKNVLIDTSIHTA 123
            +  +      DPE+W+ Q+FRSID  +    FP+ P++A  R L+  KN LID SI  A
Sbjct: 388 -VRPSPVTTLEDPETWNVQLFRSIDGGAAAFPFPEKPREAADRGLITAKNSLIDRSIQDA 446

Query: 124 YVKAIRAAQHFIYIENQYFLGSSYNWDSN----KDLGANNLIPMEIALKIANKIRANERF 179
           Y+ AIR A+HFIYIENQYF+GSS++W +     +D+ A NLIP E++LKI +KI A ERF
Sbjct: 447 YINAIRRARHFIYIENQYFIGSSFDWAAKDIKVEDINALNLIPKELSLKIVSKIEAGERF 506

Query: 180 SAYILIPMWPEGVPTSAPTQRILFWQQKTMQMMYDTIYKALVEVGLENTYEPQDYLNFFC 239
           + YI+IP+WPEG+P SA  Q IL WQ++TM+MMY  I +AL   G+     P+DYL FFC
Sbjct: 507 TVYIVIPLWPEGIPESASVQAILDWQRRTMEMMYTDIVQALQARGIHAN--PRDYLTFFC 564

Query: 240 LGNRE 244
           LGNRE
Sbjct: 565 LGNRE 569


>GSVIVT01016876001 assembled CDS
          Length = 950

 Score =  219 bits (559), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 118/240 (49%), Positives = 146/240 (60%), Gaps = 35/240 (14%)

Query: 5   GCPREPWHDLHSKIDGPAAYDILTNFEERWSKASKPHGLQKLKASHDDALLRIERIPEIL 64
           G PREPWHD H+ I G AA D+LTNFE+RWSK   P             L+ I  I E+ 
Sbjct: 565 GGPREPWHDAHACITGEAARDVLTNFEQRWSKQCNP-----------SLLVPIGTITEL- 612

Query: 65  GIAEASSQADNDPESWHTQVFRSIDSNSVKGFPDDPKDAPSRNLLCGKNVLIDTSIHTAY 124
               AS  ++ D   W  QV+RSID  S    P              +N  ++ SIH AY
Sbjct: 613 ----ASIPSERD---WKVQVYRSIDHVSASHLP--------------RNFAVEQSIHEAY 651

Query: 125 VKAIRAAQHFIYIENQYFLGSSYNWDSNKDLGANNLIPMEIALKIANKIRANERFSAYIL 184
           V+AIR A+ FIYIENQYF+G  + W+ ++  G  NLIP+EIALK+A+KIRA ERF+ YIL
Sbjct: 652 VEAIRRAERFIYIENQYFIGGCHLWEKDQHAGCRNLIPIEIALKVASKIRAKERFAVYIL 711

Query: 185 IPMWPEGVPTSAPTQRILFWQQKTMQMMYDTIYKALVEVGLENTYEPQDYLNFFCLGNRE 244
           IPMWPEG P S P Q IL W ++TM MMY  I +A+ E G   +  P+DYLNFFCL NRE
Sbjct: 712 IPMWPEGAPESEPGQDILHWTRETMAMMYRLIGEAIDENG--GSGHPRDYLNFFCLANRE 769


>GSVIVT01015542001 assembled CDS
          Length = 703

 Score =  159 bits (401), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 83/199 (41%), Positives = 118/199 (59%), Gaps = 37/199 (18%)

Query: 5   GCPREPWHDLHSKIDGPAAYDILTNFEERWSKASKPHGLQKLKASHDDALLRIERIPEIL 64
           G PREPWHD+H +++G  A+D+L NFE+RW K               D L+++  + +I+
Sbjct: 367 GGPREPWHDIHCRLEGAIAWDVLFNFEQRWRKQGG-----------KDLLVQLRELDDII 415

Query: 65  GIAEASSQADNDPESWHTQVFRSIDSNSVKGFPDDPKDAPSRNLLCGKNVLIDTSIHTAY 124
            I  +      D E+W+ Q+                       L+CG + +ID SI  AY
Sbjct: 416 -IPPSPVMFPEDHETWNVQL---------------------AGLICGNDHIIDRSIQDAY 453

Query: 125 VKAIRAAQHFIYIENQYFLGSSYNWDSN----KDLGANNLIPMEIALKIANKIRANERFS 180
           + AIR A++FIYIENQYFLGSS+ W+ +    +D+GA +LIP E++LKI +KI A ERFS
Sbjct: 454 INAIRRAKNFIYIENQYFLGSSFGWNLDGLKVEDIGALHLIPKELSLKIVSKIEAGERFS 513

Query: 181 AYILIPMWPEGVPTSAPTQ 199
            Y++IPMWPEGVP S+  Q
Sbjct: 514 VYVVIPMWPEGVPESSCAQ 532


>GSVIVT01015543001 assembled CDS
          Length = 604

 Score =  127 bits (320), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 102/175 (58%), Gaps = 37/175 (21%)

Query: 23  AYDILTNFEERWSKASKPHGLQKLKASHDDALLRIERIPEILGIAEASSQADNDPESWHT 82
           A+D+L NFE+RW K               D L+++  + +I+ I  +      D E+W+ 
Sbjct: 285 AWDVLFNFEQRWRKQGG-----------KDLLVQLRELDDII-IPPSPVMFPEDHETWNV 332

Query: 83  QVFRSIDSNSVKGFPDDPKDAPSRNLLCGKNVLIDTSIHTAYVKAIRAAQHFIYIENQYF 142
           Q+                       L+CG + +ID SI  AY+ AIR A++FIYIENQYF
Sbjct: 333 QL---------------------AGLICGSDHIIDRSIQDAYIHAIRKAKNFIYIENQYF 371

Query: 143 LGSSYNWDSN----KDLGANNLIPMEIALKIANKIRANERFSAYILIPMWPEGVP 193
           LGSS+ W+S+    +D+GA++LIP E++LK+ +KI   ERFS Y+++PMWPEG+P
Sbjct: 372 LGSSFCWNSDGLKVEDIGASHLIPKELSLKVVSKIETGERFSIYVVVPMWPEGIP 426


>GSVIVT01035095001 assembled CDS
          Length = 1121

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 13/130 (10%)

Query: 116 IDTSIHTAYVKAIRAAQHFIYIENQYFLGSSYNWDSNKDLGANNLIPMEIALKIANKIRA 175
           ++ S H AY   I  A+HFIYIENQ+F+       S  ++  N ++ + +  +I      
Sbjct: 781 VEDSTHNAYCSLIEKAEHFIYIENQFFISGL----SGDEIIRNRVLEV-LYRRIMQAYND 835

Query: 176 NERFSAYILIPMWP---EGVP--TSAPTQRILFWQQKTMQMMYDTIYKALVEVGLENTYE 230
            + F   I+IP+ P    G+    +A  + I+ WQ +T+    ++I + L +V    T+ 
Sbjct: 836 KKCFRVIIVIPLLPGFQGGLDDGGAASVRAIMHWQYRTICRGNNSILQNLYDVIGHKTH- 894

Query: 231 PQDYLNFFCL 240
             DY++F+ L
Sbjct: 895 --DYISFYGL 902