Jatropha Genome Database
- JcCA0044231.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0044231.10 + phase: 2 /partial
(171 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01012110001 assembled CDS 164 2e-41
GSVIVT01026207001 assembled CDS 141 2e-34
GSVIVT01008806001 assembled CDS 63 8e-11
GSVIVT01019630001 assembled CDS 63 8e-11
GSVIVT01018839001 assembled CDS 62 1e-10
GSVIVT01027579001 assembled CDS 60 6e-10
GSVIVT01036549001 assembled CDS 54 5e-08
GSVIVT01019883001 assembled CDS 53 6e-08
GSVIVT01012250001 assembled CDS 50 4e-07
GSVIVT01027577001 assembled CDS 50 7e-07
GSVIVT01018450001 assembled CDS 49 1e-06
GSVIVT01000802001 assembled CDS 49 1e-06
GSVIVT01008140001 assembled CDS 49 1e-06
GSVIVT01021303001 assembled CDS 47 3e-06
GSVIVT01036551001 assembled CDS 47 3e-06
GSVIVT01001437001 assembled CDS 47 4e-06
GSVIVT01009219001 assembled CDS 47 5e-06
GSVIVT01012249001 assembled CDS 47 5e-06
GSVIVT01025945001 assembled CDS 47 6e-06
GSVIVT01009815001 assembled CDS 46 9e-06
>GSVIVT01012110001 assembled CDS
Length = 256
Score = 164 bits (414), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 119/174 (68%), Gaps = 7/174 (4%)
Query: 1 MKQIIERYQKLRGNSIPEHDS---LREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISF 57
M+QII RYQ++ G I + D+ E L+ E+ +R ET LQL+LQ Y G+D+SSI F
Sbjct: 64 MEQIIRRYQRVTGTHISKQDNRVGAIEQLHNEITRMRNETHNLQLSLQRYTGDDLSSIQF 123
Query: 58 EDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQD--QRVAME 115
+DL ELEQ+LE S+ K+R RK +LLQQQ+DNL++K +MLE+EN I WIQ+ Q AME
Sbjct: 124 KDLEELEQQLEHSIKKVRARKYQLLQQQIDNLQRKAKMLEDENEQICHWIQEKQQVAAME 183
Query: 116 YHQVTIEAKPAEHQQVLEQFPFCGE--PSSLLQLAIIPSQIQSYHLQLAQPNLQ 167
Q+ IE KP E QQV+EQFPF GE P+S+LQLA + Y LQ PNLQ
Sbjct: 184 QQQLGIELKPVEEQQVMEQFPFSGEEQPNSVLQLATLSPHFYPYRLQPTHPNLQ 237
>GSVIVT01026207001 assembled CDS
Length = 218
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 107/144 (74%), Gaps = 3/144 (2%)
Query: 1 MKQIIERYQKLRGNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFEDL 60
M QIIERYQK+ G IPEHDS RE +Y EL +RKET RLQ +++ Y GED+SSI +EDL
Sbjct: 64 MDQIIERYQKVTGTRIPEHDS-REQIYNELTRMRKETSRLQRSMRGYTGEDLSSIPYEDL 122
Query: 61 GELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQRVAMEYHQVT 120
+LEQ+LE S K+R RKN+LLQQQLDNLR+KE+MLEEEN +Y WI++ R A++Y Q
Sbjct: 123 DQLEQQLEHSADKVRARKNQLLQQQLDNLRRKEQMLEEENSKMYHWIKENRAALDYQQAA 182
Query: 121 IEAKPAE-HQQVLEQF-PFCGEPS 142
IE KP E H Q+L+Q GE S
Sbjct: 183 IEVKPVEHHHQMLDQAETLTGEVS 206
>GSVIVT01008806001 assembled CDS
Length = 184
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 21/164 (12%)
Query: 4 IIERYQKLRGNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFEDLGEL 63
I++RY K G + D+ E+L EL ++KE +Q+ L+ +GED+SS+ ++L +
Sbjct: 39 ILDRYHKQSGKRL--WDAKHENLNNELDRIKKENDSMQIELRHLKGEDISSLHHKELMAI 96
Query: 64 EQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQRVAMEYHQVTIEA 123
E LE +A +RN++ E + ++K +R+LEEEN ++ + Q + ME V E
Sbjct: 97 EDALEIGLASVRNKQMEFYKM----VKKNQRILEEENKHLNYIVHHQGMPMEAGNVR-EV 151
Query: 124 KPAEHQQVLEQFPFCGEPSSLLQLAIIPSQIQSYHLQLAQPNLQ 167
+ HQ+ + + P ++ +Q QPNLQ
Sbjct: 152 ESGYHQRAVRDYN--------------PQMPFAFRVQPIQPNLQ 181
>GSVIVT01019630001 assembled CDS
Length = 596
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 1 MKQIIERYQKLRGNSIPEHDS-LREHLYGELAMLRKETCRLQLNLQLY-RGEDMSSISFE 58
M+QI+ERYQK +G +HD+ L+ H EL +R ET LQL LQ + D+SSI +E
Sbjct: 64 MEQIVERYQKAKGTF--KHDNKLKIHHIDELKRIRDETHHLQLTLQHHSTTHDLSSIRYE 121
Query: 59 DLGELEQKLESSVAKIRNRKN 79
DL ELEQ+LE S+ K+R KN
Sbjct: 122 DLEELEQQLEHSMNKVRVLKN 142
>GSVIVT01018839001 assembled CDS
Length = 179
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 2 KQIIERYQKLRGNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFEDLG 61
K++ ++YQK G I S E + L L++ +L+ ++ GED+ +S EDL
Sbjct: 19 KKVYDQYQKTLG--IDLWSSHYERMQENLRKLKEINNKLRREIRQRMGEDLGDLSIEDLR 76
Query: 62 ELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQRVAMEYHQVTI 121
LEQK+++S+ +R RK +++ Q + RKK R LEE++GN+ +
Sbjct: 77 GLEQKMDASLGLVRERKYHVIKTQTETYRKKVRNLEEQHGNLL--------------LNF 122
Query: 122 EAKPAE-HQQVLEQFPFCGEPSSLLQLAIIPSQIQSYHLQLAQPNLQGSG 170
EAK + H ++E G+ S + A S + ++ L A PNL G
Sbjct: 123 EAKCDDPHYGLVEN---DGDYESAVAFANGASNLYAFRLHQAHPNLHHDG 169
>GSVIVT01027579001 assembled CDS
Length = 218
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 1 MKQIIERYQK----LRGNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSIS 56
M++ IERYQ+ + N+ + +HL E A + K+ L+++ + GE + S S
Sbjct: 62 MQETIERYQRHTKDVHTNNYKTTEHNMQHLKHEAANMAKKIELLEISKRKLLGEGLGSCS 121
Query: 57 FEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENG 101
E+L ++EQ+LE SV+ IR RKN++ ++Q++ L++KE+ L EN
Sbjct: 122 IEELQQIEQQLERSVSSIRARKNQVFKEQIEQLKEKEKALAAENA 166
>GSVIVT01036549001 assembled CDS
Length = 247
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
Query: 1 MKQIIERYQKLRGNSIPEHD--SLREHLYGELAM-LRKETCR---LQLNLQLYRGEDMSS 54
M++I+ERY++ S+ E S G +M K T R LQ NL+ + GED+
Sbjct: 63 MERILERYERY---SLSERQLLSTDPDPQGNWSMDYPKLTARIEVLQRNLRHFVGEDLDP 119
Query: 55 ISFEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEEN 100
+S +L LEQ+L++++ +IR RKN+L+ + + L+KKE+ L E+N
Sbjct: 120 LSLRELQNLEQQLDTALKRIRTRKNQLMHESISELQKKEKSLVEQN 165
>GSVIVT01019883001 assembled CDS
Length = 207
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Query: 1 MKQIIERYQ-KLRGNSI-----PEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSS 54
+ + IERYQ K +G I PE++ + HL GE L K+ L+++ + GE + S
Sbjct: 55 INKTIERYQSKAKGLGISKRGAPENE--QHHLEGETVDLAKKIELLEVSKRRLLGECLDS 112
Query: 55 ISFEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNI 103
S E+L ++E +LE S++ IR +KN L + ++ L+++ER+L EEN +
Sbjct: 113 CSIEELQQIENELEQSLSNIRIQKNHLCKGHIERLKEQERILGEENAKL 161
>GSVIVT01012250001 assembled CDS
Length = 241
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 47 YRGEDMSSISFEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRW 106
+ GED+ S+S ++L LEQ+L++++ IR+RKN+L+ + + L++KE+ ++E+N + +
Sbjct: 112 FLGEDLDSLSLKELQNLEQQLDTALKHIRSRKNQLMYESISELQRKEKAMQEQNNMLAKE 171
Query: 107 I--QDQRVAMEYH 117
I +++ VA + H
Sbjct: 172 IKEKEKTVAQQTH 184
>GSVIVT01027577001 assembled CDS
Length = 244
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
Query: 3 QIIERYQKLRGNSIPEHDSL---REHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFED 59
+ +ERYQ++ P+ +++ + Y E++ L+ + LQ + GED+ +S ++
Sbjct: 64 KTLERYQRV--CYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVKE 121
Query: 60 LGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEEN 100
L LE++LE ++A+ R RK +++ +Q+++LR+KER L + N
Sbjct: 122 LQNLEKQLEGALAQARQRKTQMMIEQMEDLRRKERQLGDLN 162
>GSVIVT01018450001 assembled CDS
Length = 249
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 62/104 (59%), Gaps = 6/104 (5%)
Query: 1 MKQIIERYQKL----RGNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSIS 56
M + IERY++ R N+ EHD R+ + E + L+ + L + + GED+ +S
Sbjct: 62 MTKTIERYRRCCYASRDNNDAEHD--RQIGHEEYSKLKAKYESLMDSQRHLLGEDLGLLS 119
Query: 57 FEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEEN 100
++L LE+ LE ++++ R RK +++ +Q+D L+KKE LEE N
Sbjct: 120 IKELQNLEKMLEGTLSQARQRKAQMMLKQMDELKKKEHDLEEMN 163
>GSVIVT01000802001 assembled CDS
Length = 363
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 93/167 (55%), Gaps = 12/167 (7%)
Query: 1 MKQIIERYQKL---RGNSIPEHDSLREHLYGELAMLRKETCRLQ-LNLQLYRGEDMSSIS 56
++ IERY+K+ N+ ++ + E + LR++ +Q LN + GE +SS++
Sbjct: 151 VRTTIERYKKVCSDSSNTGSVSEANAQFYQQEASKLRRQIRDIQNLNRHIL-GEALSSLN 209
Query: 57 FEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQRVAMEY 116
F++L LE +LE +++IR++KNELL +++ ++K+E +E +N N++ ++ Q E
Sbjct: 210 FKELKNLETRLEKGISRIRSKKNELLFAEIEYMQKRE--IELQNSNLF--LRAQIAENER 265
Query: 117 HQVTIEAKPAEHQQVLEQFPFCGEPSSLLQLAII-PSQIQSYHLQLA 162
Q + P + + Q P+ + +LL + ++ P+ S H Q A
Sbjct: 266 AQQQMNLMPGSQYESVPQQPY--DSQNLLPVNLLDPNHHYSRHDQTA 310
>GSVIVT01008140001 assembled CDS
Length = 243
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 29 ELAMLRKETCRLQLNLQLYRGEDMSSISFEDLGELEQKLESSVAKIRNRKNELLQQQLDN 88
E A L+ LQ + + + GED+ S+S ++L LEQ+L++S+ R RKN+L+ + L
Sbjct: 94 EYAKLKARMEVLQKSQRNFMGEDLDSLSLKELQNLEQQLDNSLKSTRTRKNQLMYESLSE 153
Query: 89 LRKKERMLEEENGNIYRWIQDQRVAMEYHQVTIEAKPAEHQQVLEQFPFCGEPSSLLQ 146
L KK + L+EE+ + +Q++ E + AE Q +Q PS LLQ
Sbjct: 154 LHKKGKALQEEHDLLTAKVQEK-----------EKEQAEQAQWNQQNQDLDSPSFLLQ 200
>GSVIVT01021303001 assembled CDS
Length = 226
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 62/105 (59%), Gaps = 7/105 (6%)
Query: 1 MKQIIERYQKLRGNS-----IPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSI 55
+K IERY+K +S + E ++ + E + L ++ LQ + + GE + S+
Sbjct: 62 VKSTIERYKKASADSSNTGSVSEANA--QFYQQESSKLHQQIRNLQNSNRHMLGESLGSL 119
Query: 56 SFEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEEN 100
+F+DL LE +LE +++IR+RKNELL +++ ++K+E L +N
Sbjct: 120 NFKDLKSLEIRLEKGISRIRSRKNELLFAEIEYMQKREIDLHNDN 164
>GSVIVT01036551001 assembled CDS
Length = 243
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 78/144 (54%), Gaps = 9/144 (6%)
Query: 1 MKQIIERYQKLRGNSIPEHDSLRE--HLYGELAMLRKETCRLQLNLQLYRGEDMSSISFE 58
M + +ERYQK ++ +E Y E L+ + LQ + GED+ ++ +
Sbjct: 63 MLKTLERYQKCSYGAVEVSRPSKELESSYREYLKLKSKFESLQRTQRNLLGEDLGPLNTK 122
Query: 59 DLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQRVAMEYH- 117
+L +LE++LE+S+ ++R+ K + + QL +L+ KE++L E N + R + + ++++ H
Sbjct: 123 ELEQLERQLETSLKQVRSTKTQFMLDQLSDLQNKEQVLVESNKALTRKLDE--ISVKNHL 180
Query: 118 QVTIEAK----PAEHQQVLEQFPF 137
Q++ E+ P HQQ Q F
Sbjct: 181 QLSWESGEQSMPYGHQQAQSQGFF 204
>GSVIVT01001437001 assembled CDS
Length = 248
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 1 MKQIIERYQKLRGNSIPEHDSLREHLYGELAMLRKETCRLQLN-LQLYRGEDMSSISFED 59
MK+II RY KL + + E E+ +L+ E +LQ LQL G+D+S +S ++
Sbjct: 62 MKRIISRYNKLDSSEGALVEYKAEQEPKEVDILKDEIRKLQTRQLQLL-GKDLSGLSLKE 120
Query: 60 LGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQR 111
L LEQ+L S+ ++ RK ++L +QL+ R +E+ EN + R +++ R
Sbjct: 121 LQNLEQQLNESLLSVKERKEQVLMEQLEQSRVQEQRAVLENETLRRQVEELR 172
>GSVIVT01009219001 assembled CDS
Length = 240
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 29 ELAMLRKETCRLQLNLQLYRGEDMSSISFEDLGELEQKLESSVAKIRNRKNELLQQQLDN 88
E AMLR++ LQ N + GE++S +S +DL LE +LE S+ +R +K+++L ++
Sbjct: 92 EAAMLRQQLQHLQENHRQMMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILIDEIQE 151
Query: 89 LRKKERMLEEENGNIYRWI 107
L +K +L EN +Y+ +
Sbjct: 152 LNQKGNLLHNENVELYKKV 170
>GSVIVT01012249001 assembled CDS
Length = 243
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 1 MKQIIERYQKLRGNSIPEHDSLRE--HLYGELAMLRKETCRLQLNLQLYRGEDMSSISFE 58
M + +ERYQ+ +++ +E + Y E L+ + LQ + + GED+ + +
Sbjct: 63 MPETLERYQRCSYSALEASQPAKETQNSYQEYLKLKSKVEVLQRTQRNFLGEDLGHLGTK 122
Query: 59 DLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYR 105
+L +LE +L+ S+ +IR+ K + + QL +L++KE++L E N + R
Sbjct: 123 ELEQLEHQLDKSLKQIRSTKTQFMLDQLSDLQRKEQILMEANNALRR 169
>GSVIVT01025945001 assembled CDS
Length = 233
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 1 MKQIIERYQKLRGNSIPEHDSLR---EHLYGELAMLRKETCRLQLNLQLYRGEDMSSISF 57
+K I+RY+K +S ++ ++ E A LR++ LQ + + G+ ++S++
Sbjct: 62 IKSTIDRYKKASSDSTNGGSTMEINAQYYQQESAKLRQQIQMLQNSNRHLMGDSLASLTV 121
Query: 58 EDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIY 104
++L +LE +LE + +IR++K+ELL +++ L+K+E +E EN ++Y
Sbjct: 122 KELKQLENRLERGITRIRSKKHELLLAEIEYLQKRE--IELENESVY 166
>GSVIVT01009815001 assembled CDS
Length = 226
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 2 KQIIERYQKLRGNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFEDLG 61
KQI ++YQ G + + E + L L+ L+ ++ GE +S +S E+L
Sbjct: 65 KQIFDQYQNTLGVDLWSYHY--ERMQENLKKLKDVNKNLRKEIRQRMGEHLSDLSVEELR 122
Query: 62 ELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNI 103
+LEQ++ESS+ +R+RK +++ Q++ +KK R +E+ + N+
Sbjct: 123 DLEQEMESSLKMVRDRKYQVINNQIETFKKKVRNVEQIHKNL 164