Jatropha Genome Database

JcCA0043771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0043771.10 + phase: 0 
         (334 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01023897001 assembled CDS                                       484   e-137
GSVIVT01034063001 assembled CDS                                       325   2e-89
GSVIVT01016434001 assembled CDS                                       313   6e-86
GSVIVT01026930001 assembled CDS                                       268   3e-72
GSVIVT01015369001 assembled CDS                                       251   4e-67
GSVIVT01017070001 assembled CDS                                       243   1e-64
GSVIVT01036908001 assembled CDS                                       232   2e-61

>GSVIVT01023897001 assembled CDS
          Length = 587

 Score =  484 bits (1245), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 246/302 (81%), Positives = 260/302 (86%), Gaps = 5/302 (1%)

Query: 15  ERCGSYSLSADVXXXXXXXXXXXXXXDGGEGASSSITSSP---RPP-GKSSFSFQGPLML 70
           +RCGSYSLSADV              DG EGASSS+TSSP   RP  G SSF    PLML
Sbjct: 15  DRCGSYSLSADVSESESCSSFSCRRYDG-EGASSSMTSSPLACRPVVGNSSFPVGPPLML 73

Query: 71  PVIGGKDFMICDVKPEKRETDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITN 130
           PVIGG+D ++   KPEKRETDLSE EMMKERFAKLLLGEDMSGGGKGVCTALAISNAITN
Sbjct: 74  PVIGGRDVVVWGEKPEKRETDLSEAEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITN 133

Query: 131 LSATVFGELWRLEPLAPQKKSMWRREMEWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRP 190
           LSATVFGELWRLEPLAPQKK+MW REMEWLL VSDSIVELVPSIQQFPGGGTYEVM  RP
Sbjct: 134 LSATVFGELWRLEPLAPQKKAMWCREMEWLLCVSDSIVELVPSIQQFPGGGTYEVMATRP 193

Query: 191 RSDLYMNLPALKKLDAMLISMLDGFCDTEFWYVDRGIILADGGDCDVYPSSIASARPSIR 250
           RSDLYMNLPALKKLDAML+SMLDGFC+TEFWYVDRGII+A+  + D YP S +S RPSIR
Sbjct: 194 RSDLYMNLPALKKLDAMLLSMLDGFCETEFWYVDRGIIVAEADNHDAYPLSASSGRPSIR 253

Query: 251 QEEKWWLPCPRVPSNGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPSAYLETL 310
           QEEKWWLPCP+VP NGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIP+AYLETL
Sbjct: 254 QEEKWWLPCPKVPPNGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPTAYLETL 313

Query: 311 PK 312
           PK
Sbjct: 314 PK 315


>GSVIVT01034063001 assembled CDS
          Length = 1231

 Score =  325 bits (832), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 163/251 (64%), Positives = 190/251 (75%), Gaps = 8/251 (3%)

Query: 82  DVKPEKRETDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWR 141
           ++K EK+ + +S++EMMKERF+KLLLGEDMSG G GVCTALAISNAITNL AT+FG+LWR
Sbjct: 720 EMKLEKQGSTISDIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATLFGQLWR 779

Query: 142 LEPLAPQKKSMWRREMEWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRPRSDLYMNLPAL 201
           LEPL  +KK+MWRREMEWLL VSD IVEL+PS Q FP G   EVM  RPRSDLY+NLPAL
Sbjct: 780 LEPLPAEKKAMWRREMEWLLCVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLYINLPAL 839

Query: 202 KKLDAMLISMLDGFCDTEFWYVDRGIILADGGDCDVYPSSIASARPSIRQEEKWWLPCPR 261
           +KLD ML+ +LD F DTEFWYVD+GI+  D      +       RP  RQEEKWWLP PR
Sbjct: 840 RKLDNMLLEVLDSFEDTEFWYVDQGILAPDTDGSSSF------RRPLQRQEEKWWLPVPR 893

Query: 262 VPSNGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPSAYLETLPKVWFLSLFD- 320
           VP  GL E++RK+LQ  RDCTNQILKAAMAINS+ LAEMEIP +YLE LPK    SL D 
Sbjct: 894 VPPGGLHENSRKQLQHKRDCTNQILKAAMAINSTALAEMEIPESYLEVLPKNGKSSLGDL 953

Query: 321 -RNVCTTSMFT 330
                T+  F+
Sbjct: 954 IHRYVTSDQFS 964



 Score =  285 bits (729), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 146/249 (58%), Positives = 174/249 (69%), Gaps = 6/249 (2%)

Query: 72  VIGGKDFMICDVKPEKRETDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNL 131
           + G +   + ++K EK  +++SEVEMMK RF++LLLGEDMSG G GVCTALAIS  ITNL
Sbjct: 154 IHGAEKPHLHEMKFEKHCSEISEVEMMKARFSRLLLGEDMSGRGIGVCTALAISKGITNL 213

Query: 132 SATVFGELWRLEPLAPQKKSMWRREMEWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRPR 191
            AT+FG++W+LEPL P KK+MWRR+ EWLLSVSD IVE  P+ Q+FP G   EVM  R R
Sbjct: 214 YATLFGKIWKLEPLDPMKKAMWRRDKEWLLSVSDHIVEFTPAWQKFPDGSEGEVMTCRLR 273

Query: 192 SDLYMNLPALKKLDAMLISMLDGFCDTEFWYVDRGIILADGGDCDVYPSSIASARPSIRQ 251
           +DLY NLPAL+KLD MLI  LD F DTEFWYV++GI+          P  +        Q
Sbjct: 274 ADLYANLPALRKLDDMLIETLDSFEDTEFWYVNQGILSPKADGSSSSPGHLH------HQ 327

Query: 252 EEKWWLPCPRVPSNGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPSAYLETLP 311
           EEK WLP P VP  GLSE++RK LQQ RD TNQI KA  AINS+ LAEME+P  YLE LP
Sbjct: 328 EEKCWLPVPHVPPTGLSENSRKHLQQKRDFTNQIRKAVRAINSTTLAEMEVPEPYLEALP 387

Query: 312 KVWFLSLFD 320
           K    SL D
Sbjct: 388 KNVRASLGD 396


>GSVIVT01016434001 assembled CDS
          Length = 814

 Score =  313 bits (803), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 154/233 (66%), Positives = 183/233 (78%), Gaps = 10/233 (4%)

Query: 82  DVKPEKRETDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWR 141
           D K ++  + +SE+EMMKERF+KLLLGEDMSG GKGVCTALAISNAITNL AT+FG+LWR
Sbjct: 88  DSKVKQLGSKVSEIEMMKERFSKLLLGEDMSGSGKGVCTALAISNAITNLCATIFGQLWR 147

Query: 142 LEPLAPQKKSMWRREMEWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRPRSDLYMNLPAL 201
           LEPL P+KKSMWRREME LL VSD IV+L+PS Q FP G   EVM  RPRSD+++NLPAL
Sbjct: 148 LEPLPPEKKSMWRREMELLLCVSDHIVQLIPSWQTFPDGSKLEVMTCRPRSDIFINLPAL 207

Query: 202 KKLDAMLISMLDGFCDTEFWYVDRGIIL--ADGGDCDVYPSSIASARPSIRQEEKWWLPC 259
           +KLD ML+ +LDGF +TEFWYVD+GII    DG        S +  +P  RQEEKWWLP 
Sbjct: 208 RKLDNMLLEILDGFTNTEFWYVDQGIIAPETDG--------SASFRKPIQRQEEKWWLPV 259

Query: 260 PRVPSNGLSEDARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPSAYLETLPK 312
           PRVP  GLSE++RK+L   R+  NQILKAAMAINS+ LAEME+P ++LE LPK
Sbjct: 260 PRVPPGGLSENSRKQLNHKRESANQILKAAMAINSNALAEMEVPESFLEALPK 312


>GSVIVT01026930001 assembled CDS
          Length = 495

 Score =  268 bits (684), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 129/220 (58%), Positives = 165/220 (75%), Gaps = 7/220 (3%)

Query: 93  SEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKSM 152
           +E+E+MKERF+KLLLGEDMSG GKGVCTA+ ISNAITNL AT+FG+  +LEPL+P+KKSM
Sbjct: 113 AELELMKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATIFGQNQKLEPLSPEKKSM 172

Query: 153 WRREMEWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRPRSDLYMNLPALKKLDAMLISML 212
           W+REM  LL+V D +VE  PS+Q  P G + EVM  RPRSD+++NLPAL+KLD ML  +L
Sbjct: 173 WKREMNCLLAVCDYMVEFFPSLQTLPNGTSVEVMASRPRSDIHINLPALQKLDTMLQEIL 232

Query: 213 DGFCDTEFWYVDRGIILADGGDCDVYPSSIASARPSIRQEEKWWLPCPRVPSNGLSEDAR 272
           D F +TEFWY ++G +++           + + RP    +EKWWLP P +P  GLSE AR
Sbjct: 233 DSFKETEFWYAEQGKLVSATRAGSF---RLITQRP----DEKWWLPVPCIPRGGLSEKAR 285

Query: 273 KRLQQCRDCTNQILKAAMAINSSVLAEMEIPSAYLETLPK 312
           K L+  RDC NQI KAAM+INSS+LAEM+IP +Y+  LPK
Sbjct: 286 KDLKHTRDCANQIHKAAMSINSSLLAEMKIPDSYIAALPK 325


>GSVIVT01015369001 assembled CDS
          Length = 536

 Score =  251 bits (640), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 129/228 (56%), Positives = 163/228 (71%), Gaps = 18/228 (7%)

Query: 94  EVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKSMW 153
           EVE ++ERFAKLLLGEDMSG G GV +ALA+SNAITNL+A+VFGE W+LEP++ ++K+MW
Sbjct: 104 EVEQIRERFAKLLLGEDMSGRGTGVSSALALSNAITNLAASVFGEQWKLEPMSAERKAMW 163

Query: 154 RREMEWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRPRSDLYMNLPALKKLDAMLISMLD 213
           R++++ LLSV+D IVELVPS Q    G T EVMV R R DL MN+PAL+KLDAMLI  LD
Sbjct: 164 RKDIDLLLSVADYIVELVPSQQTAKDGTTMEVMVSRQRKDLLMNIPALRKLDAMLIEHLD 223

Query: 214 GFCD-TEFWYVDRGIILADGGDCDVYPSSIASARPSIRQEEKWWLPCPRVPSNGLSEDAR 272
            F    EFWYV R     D G                R+++KWWLP P+VP NGLS+ +R
Sbjct: 224 NFKGPNEFWYVSRDA--EDAGS---------------REDDKWWLPRPKVPPNGLSDASR 266

Query: 273 KRLQQCRDCTNQILKAAMAINSSVLAEMEIPSAYLETLPKVWFLSLFD 320
           K LQ  ++  NQ+LKAAMAIN+ +L+EME+P  Y+E+LPK    SL D
Sbjct: 267 KWLQFQKESVNQVLKAAMAINAQLLSEMEVPDDYIESLPKNGRASLGD 314


>GSVIVT01017070001 assembled CDS
          Length = 434

 Score =  243 bits (619), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 128/223 (57%), Positives = 159/223 (71%), Gaps = 13/223 (5%)

Query: 98  MKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKSMWRREM 157
           MKERF+KLLLGEDMSG GKGV +ALA+SNAITN++A+VFGEL RLEP+  ++K+MWRRE+
Sbjct: 1   MKERFSKLLLGEDMSGHGKGVSSALALSNAITNVAASVFGELRRLEPMPVERKTMWRREI 60

Query: 158 EWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRPRSDLYMNLPALKKLDAMLISMLDGFCD 217
           +WLLSVSD IVE+VP  Q+   G + EVMV R R DL MN+PAL+KLDAMLI  L+ F D
Sbjct: 61  DWLLSVSDHIVEMVPQ-QRSKDGTSMEVMVTRQRCDLLMNIPALRKLDAMLIDTLENFKD 119

Query: 218 TEFWYVDRGIILADGGDCDVYPSSIASARPSIRQEEKWWLPCPRVPSNGLSEDARKRLQQ 277
            + +Y   G    D  D        +S   S R  +KWW+P  +VP NGLSE  RK LQ 
Sbjct: 120 QKEFYYPSG----DAKD--------SSREDSQRTSDKWWIPNAKVPPNGLSEVTRKWLQF 167

Query: 278 CRDCTNQILKAAMAINSSVLAEMEIPSAYLETLPKVWFLSLFD 320
            +D  NQ+LKAAMAIN+ +L+EMEIP  Y+E+LPK    SL D
Sbjct: 168 QKDSVNQVLKAAMAINAQILSEMEIPENYIESLPKNGRASLGD 210


>GSVIVT01036908001 assembled CDS
          Length = 912

 Score =  232 bits (591), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 116/222 (52%), Positives = 157/222 (70%), Gaps = 15/222 (6%)

Query: 92  LSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKS 151
            S+VE+MKERF+KLLLGED++GG KG+ +ALA+SNAITNL+ +VFGELW+LEPL+ ++K 
Sbjct: 117 FSDVEVMKERFSKLLLGEDITGGKKGLTSALALSNAITNLAVSVFGELWKLEPLSEERKV 176

Query: 152 MWRREMEWLLSVSDSIVELVPSIQQFPGGGTYEVMVPRPRSDLYMNLPALKKLDAMLISM 211
            W+REM+WLLS ++ +VELVP+ Q    G T E+M P+ R+D++MNLPAL+KLD+MLI  
Sbjct: 177 KWQREMDWLLSPTNYMVELVPAKQSGANGRTLEIMTPKARADIHMNLPALQKLDSMLIET 236

Query: 212 LDGFCDTEFWYVDRGIILADGGDCDVYPSSIASARP-SIRQEEKWWLPCPRVPSNGLSED 270
           LD   DTEFWY       A+GG       S A  R  S+ Q ++WWLP P+VP+ GLS+ 
Sbjct: 237 LDSMVDTEFWY-------AEGG-------SRAEGRTRSMSQSKRWWLPSPQVPTTGLSDP 282

Query: 271 ARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPSAYLETLPK 312
            RK+L       +Q+ KAA AIN +VL EM +P+   + L K
Sbjct: 283 ERKKLLHQAKVVHQVFKAARAINENVLLEMPVPTLIRDALAK 324