Jatropha Genome Database

JcCA0043071.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0043071.20 - phase: 0 
         (527 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01009747001 assembled CDS                                       797   0.0  
GSVIVT01023805001 assembled CDS                                       757   0.0  
GSVIVT01028270001 assembled CDS                                       693   0.0  
GSVIVT01017911001 assembled CDS                                       660   0.0  
GSVIVT01030141001 assembled CDS                                       496   e-141
GSVIVT01038262001 assembled CDS                                       348   3e-96

>GSVIVT01009747001 assembled CDS
          Length = 524

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/531 (73%), Positives = 440/531 (82%), Gaps = 11/531 (2%)

Query: 1   MDSCCAALKGAANAFNV-NRSLSNGSCPFWGDWIKGNRKSRNFNA---KNLRTESNNNGI 56
           MDSCCA +KG  +   V NR +      FWG+ I  +  S +F+    K+LR E     I
Sbjct: 1   MDSCCAKVKGNVHPVPVRNRGVGKVGSGFWGERIGTSLWSSSFSNRQWKSLRKERKAKTI 60

Query: 57  KKFKPGVAYSVFTSDVNKETATFETPVLETPTADPKKVASIILGGGAGTRLFPLTSKRAK 116
            +       +V T DV++E   FE PV E   ADP  VA+IILGGGAGTRLFPLTS+RAK
Sbjct: 61  NR-------AVLTPDVDQENLIFEGPVFEKQHADPSSVAAIILGGGAGTRLFPLTSRRAK 113

Query: 117 PAVPIGGCYRLIDIPMSNCINSGIKKIFILTQFNSCSLNRHLARTYXXXXXXXXXXXXXX 176
           PAVPIGGCYRLID+PMSNCINSGI+KIFILTQFNS SLNRH+AR Y              
Sbjct: 114 PAVPIGGCYRLIDVPMSNCINSGIRKIFILTQFNSASLNRHIARIYNFGNGVNFGDGFVE 173

Query: 177 XLAATQTPGEAGKKWFQGTADAVRQFVWVFEDSKNKNVEHVIILSGDHLYRMNYMEFVQK 236
            LAATQTPGEAG+KWFQGTADAVRQF+WVFED+KNKNVEH++ILSGDHLYRM+YM+FVQK
Sbjct: 174 VLAATQTPGEAGQKWFQGTADAVRQFIWVFEDAKNKNVEHILILSGDHLYRMDYMDFVQK 233

Query: 237 HIDSKADITVSCIPMDDSRASDYGLMKIDDTGRIIQFAEKPKGSDLEAMQVDTTVLGLSK 296
           HIDS ADITVSC+PMDDSRASDYGLMKID+TGRIIQF+EKPKG +L+AM+V+TT+LGLS+
Sbjct: 234 HIDSNADITVSCVPMDDSRASDYGLMKIDNTGRIIQFSEKPKGPNLKAMKVNTTLLGLSE 293

Query: 297 QDAPRFPYIASMGVYVFKTEVLLKLLRWSYPSSNDFGSEIIPSAVMHHNVQAYLFNDYWE 356
           ++A + PYIASMGVYVF+T+VLLKLL   Y S NDFGSEIIP AV  HNVQAYLFNDYWE
Sbjct: 294 KEAEKCPYIASMGVYVFRTDVLLKLLTRKYLSCNDFGSEIIPLAVKDHNVQAYLFNDYWE 353

Query: 357 DIGTIKSFFDANLSLAEQPPKFEFYDSKTPFYTCPRFLPPTKVDKCKIVDAIISHGCFLQ 416
           DIGTIKSFFDANL+L EQPPKFEFYD KTPFYT PRFLPPTKV++C+I+DAIISHGCFL+
Sbjct: 354 DIGTIKSFFDANLALTEQPPKFEFYDPKTPFYTSPRFLPPTKVEECRILDAIISHGCFLR 413

Query: 417 ECSIQHSVVGVRSRLESGVELIDTMMMGADYYQTESEIASLLAEGKVPVGVGQNTKIRNC 476
           ECS+Q S+VGVRSRLE GVEL DTMMMGADYYQTESEIASLLAEGKVP+GVGQNT+IRNC
Sbjct: 414 ECSVQRSIVGVRSRLEYGVELKDTMMMGADYYQTESEIASLLAEGKVPIGVGQNTRIRNC 473

Query: 477 IIDKNAKIGRDVVITNADGVLEADRPEEGFYIRSGITAIPKDATIKDGTII 527
           IIDKNAKIGRDVVI NADGV EADRP EGFYIRSGIT I K+ATI DGTII
Sbjct: 474 IIDKNAKIGRDVVIANADGVQEADRPSEGFYIRSGITVILKNATINDGTII 524


>GSVIVT01023805001 assembled CDS
          Length = 517

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/528 (68%), Positives = 432/528 (81%), Gaps = 12/528 (2%)

Query: 1   MDSCCAALKGAANAFNVNRS-LSNGSCPFWGDWIKGNRKSRNFNAKNLRTESNNNGIKKF 59
           MDSCC   K  A+    +R  LSNG   FWG+ I+G+  +  + ++           +K 
Sbjct: 1   MDSCCVTFKAKAHLAKASRGGLSNGDNEFWGERIRGSLNNSGWVSQP----------RKI 50

Query: 60  KPGVAYSVFTSDVNKETATFETPVLETPTADPKKVASIILGGGAGTRLFPLTSKRAKPAV 119
           KPGVA SV TS+  KET T + P+ E   ADPK VASIILGGGAGT+LFPLT ++A PAV
Sbjct: 51  KPGVACSVITSNNGKETVTIQAPIFERRRADPKNVASIILGGGAGTQLFPLTIRQATPAV 110

Query: 120 PIGGCYRLIDIPMSNCINSGIKKIFILTQFNSCSLNRHLARTYXXXXXXXXXXXXXXXLA 179
           P+GGCYRLIDIPMSNCINS I KIFILTQFNS SLNRH+ARTY               LA
Sbjct: 111 PVGGCYRLIDIPMSNCINSNINKIFILTQFNSASLNRHIARTYFGNGVNFGDGFVEV-LA 169

Query: 180 ATQTPGEAGKKWFQGTADAVRQFVWVFEDSKNKNVEHVIILSGDHLYRMNYMEFVQKHID 239
           ATQTPGEAG KWF+GTADAVR+F+WVFED+KNKN+E+++ILSGDHLYRM+YM+ VQ HID
Sbjct: 170 ATQTPGEAGMKWFEGTADAVRKFIWVFEDAKNKNIENILILSGDHLYRMDYMDLVQNHID 229

Query: 240 SKADITVSCIPMDDSRASDYGLMKIDDTGRIIQFAEKPKGSDLEAMQVDTTVLGLSKQDA 299
            KADITVSC+P+ +SRASDYGL+K+D+ GRIIQFAEKPKG+DL+AM+VDTT LGLS Q+A
Sbjct: 230 RKADITVSCVPVGESRASDYGLLKMDNRGRIIQFAEKPKGADLKAMKVDTTRLGLSPQEA 289

Query: 300 PRFPYIASMGVYVFKTEVLLKLLRWSYPSSNDFGSEIIPSAVMHHNVQAYLFNDYWEDIG 359
            + PYIASMGVYVFKT++LL LLRW YP+SNDFGSEIIP AVM HNV+A+LF DYWEDIG
Sbjct: 290 MKSPYIASMGVYVFKTDILLNLLRWRYPTSNDFGSEIIPLAVMEHNVEAFLFRDYWEDIG 349

Query: 360 TIKSFFDANLSLAEQPPKFEFYDSKTPFYTCPRFLPPTKVDKCKIVDAIISHGCFLQECS 419
           TIK+F++AN+ L E+ PKFEFY+ KTP +T PRFLPPTK+++C++VDAIISHGCFL+ECS
Sbjct: 350 TIKTFYEANMGLTEEFPKFEFYNPKTPIFTSPRFLPPTKIEQCQVVDAIISHGCFLRECS 409

Query: 420 IQHSVVGVRSRLESGVELIDTMMMGADYYQTESEIASLLAEGKVPVGVGQNTKIRNCIID 479
           ++HS+VG RSRL+ GVEL DT+MMGAD+YQTESEIASLLAEG VP+G+G+NTKIRNCIID
Sbjct: 410 VKHSIVGERSRLDYGVELKDTLMMGADFYQTESEIASLLAEGNVPIGIGRNTKIRNCIID 469

Query: 480 KNAKIGRDVVITNADGVLEADRPEEGFYIRSGITAIPKDATIKDGTII 527
           KNAKIG+D VI N DGV EADRP++GFYIRSGIT I + ATIKDGT+I
Sbjct: 470 KNAKIGKDAVIVNKDGVQEADRPDDGFYIRSGITIILEKATIKDGTVI 517


>GSVIVT01028270001 assembled CDS
          Length = 476

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/467 (69%), Positives = 385/467 (82%), Gaps = 16/467 (3%)

Query: 77  ATFETPVLETPTADPKKVASIILGGGAGTRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCI 136
           +T + P L  P ADPK VASIILGGGAGTRLFPLT  RAKPAVPIGGCYRLID+PMSNCI
Sbjct: 10  STLDAPELAKPEADPKTVASIILGGGAGTRLFPLTKSRAKPAVPIGGCYRLIDVPMSNCI 69

Query: 137 NSGIKKIFILTQFNSCSLNRHLARTYXXXXXXXXXXXXXXXLAATQTPGEAGKKWFQGTA 196
           NSGI KI+ILTQFNS SLNRH+ARTY               LAATQT GE+GKKWFQGTA
Sbjct: 70  NSGINKIYILTQFNSQSLNRHIARTYNLGSGVNFGDGFVEVLAATQTSGESGKKWFQGTA 129

Query: 197 DAVRQFVWVFEDSKNKNVEHVIILSGDHLYRMNYMEFVQKHIDSKADITVSCIPMDDSRA 256
           DAVRQF+W+FED++++++E+++ILSGDHLYRM+YMEFVQKHIDS ADI+VSC+PMD+SRA
Sbjct: 130 DAVRQFIWLFEDARHRHIENILILSGDHLYRMDYMEFVQKHIDSDADISVSCLPMDESRA 189

Query: 257 SDYGLMKIDDTGRIIQFAEKPKGSDLEAMQVDTTVLGLSKQDAPRFPYIASMGVYVFKTE 316
           SD+GL+KID+ G+I QF EKPKG  L++M+VDTT LGLS  +A +FPYIASMG+Y+FKT+
Sbjct: 190 SDFGLIKIDEMGQIRQFLEKPKGETLKSMRVDTTALGLSPVEAKKFPYIASMGIYLFKTD 249

Query: 317 VLLKLLR----------------WSYPSSNDFGSEIIPSAVMHHNVQAYLFNDYWEDIGT 360
           VLLKLL                 WSYP++NDFGSE+IP A    NVQAYLFN YWEDIGT
Sbjct: 250 VLLKLLSFGFNSLLLGALSISFLWSYPTANDFGSEVIPMAAEECNVQAYLFNGYWEDIGT 309

Query: 361 IKSFFDANLSLAEQPPKFEFYDSKTPFYTCPRFLPPTKVDKCKIVDAIISHGCFLQECSI 420
           IKSFFDANL+L +QPPKF FYD   P +T PRFLPPTK++KC+++D+IISHGCFL+ECS+
Sbjct: 310 IKSFFDANLALTDQPPKFHFYDPLKPIFTSPRFLPPTKIEKCRVMDSIISHGCFLRECSV 369

Query: 421 QHSVVGVRSRLESGVELIDTMMMGADYYQTESEIASLLAEGKVPVGVGQNTKIRNCIIDK 480
           +HS+VG+RSRL+ GVE+ DTMMMGADYYQTE EIA+ LAEGKVP+GVG+ TKI NCIIDK
Sbjct: 370 EHSIVGIRSRLDYGVEMKDTMMMGADYYQTEEEIAAFLAEGKVPIGVGKGTKIMNCIIDK 429

Query: 481 NAKIGRDVVITNADGVLEADRPEEGFYIRSGITAIPKDATIKDGTII 527
           NA+IG++VVITN D V EADRP EGFYIRSGIT + K++ I D TII
Sbjct: 430 NARIGKNVVITNKDKVEEADRPSEGFYIRSGITVVLKNSVIMDETII 476


>GSVIVT01017911001 assembled CDS
          Length = 482

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/444 (67%), Positives = 369/444 (83%)

Query: 84  LETPTADPKKVASIILGGGAGTRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIKKI 143
           LE    DP+ V ++ILGGGAGTRLFPLT +RAKPAVPIGG YRLID+PMSNCINSGI K+
Sbjct: 39  LEMEKRDPRTVVAVILGGGAGTRLFPLTKRRAKPAVPIGGSYRLIDVPMSNCINSGINKV 98

Query: 144 FILTQFNSCSLNRHLARTYXXXXXXXXXXXXXXXLAATQTPGEAGKKWFQGTADAVRQFV 203
           +ILTQFNS SLNRHLAR Y               LAATQTPGEAGK+WFQGTADAVRQF 
Sbjct: 99  YILTQFNSASLNRHLARAYNFGHGVNFGDGYVEALAATQTPGEAGKRWFQGTADAVRQFH 158

Query: 204 WVFEDSKNKNVEHVIILSGDHLYRMNYMEFVQKHIDSKADITVSCIPMDDSRASDYGLMK 263
           W+FED ++K +E V+ILSGDHLYRM+YM+FVQ H  S ADIT+SC+PMDDSRASD+GLMK
Sbjct: 159 WLFEDQRSKEIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMK 218

Query: 264 IDDTGRIIQFAEKPKGSDLEAMQVDTTVLGLSKQDAPRFPYIASMGVYVFKTEVLLKLLR 323
           ID+ GR++ F+EKPKG DL+AM+VDT VLGLS+++A + PYIASMGVYVFK E+LL LLR
Sbjct: 219 IDNKGRVLFFSEKPKGEDLKAMEVDTKVLGLSREEAEKKPYIASMGVYVFKKEILLNLLR 278

Query: 324 WSYPSSNDFGSEIIPSAVMHHNVQAYLFNDYWEDIGTIKSFFDANLSLAEQPPKFEFYDS 383
           W +P++NDFGSEIIP++     ++AYLFNDYWEDIGTI+SFF+ANL+L   PP+F FYD+
Sbjct: 279 WRFPTANDFGSEIIPASAKEFFIKAYLFNDYWEDIGTIRSFFEANLALTAHPPRFSFYDA 338

Query: 384 KTPFYTCPRFLPPTKVDKCKIVDAIISHGCFLQECSIQHSVVGVRSRLESGVELIDTMMM 443
             P YT  R LPP+K+D  KIVD+IISHG FL  C I+HSVVG+RSR+ S V L DT+M+
Sbjct: 339 TKPMYTSRRNLPPSKIDDSKIVDSIISHGSFLNNCFIEHSVVGIRSRVNSNVHLKDTVML 398

Query: 444 GADYYQTESEIASLLAEGKVPVGVGQNTKIRNCIIDKNAKIGRDVVITNADGVLEADRPE 503
           GADYY+T+SE+ASLLAEG+VP+G+G+NT+I++CIIDKNA+IG++VVI+N++G+ EADR  
Sbjct: 399 GADYYETDSEVASLLAEGRVPIGIGENTRIKDCIIDKNARIGKNVVISNSEGIQEADRSL 458

Query: 504 EGFYIRSGITAIPKDATIKDGTII 527
           EGFYIRSGIT I K+ TIKDG +I
Sbjct: 459 EGFYIRSGITIILKNFTIKDGFVI 482


>GSVIVT01030141001 assembled CDS
          Length = 509

 Score =  496 bits (1278), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 231/425 (54%), Positives = 311/425 (73%), Gaps = 7/425 (1%)

Query: 105 TRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIKKIFILTQFNSCSLNRHLARTYXX 164
           TRL+PLT KRAKPAVP+G  YRLIDIP+SNC+NS I KI++LTQFNS SLNRHL+R Y  
Sbjct: 90  TRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYAS 149

Query: 165 XXXXXXXXXXXXXLAATQTPGEAGKKWFQGTADAVRQFVWVFEDSKNKNVEHVIILSGDH 224
                        LAA Q+P      WFQGTADAVRQ++W+FE+    NV   ++L+GDH
Sbjct: 150 NMGGYKNEGFVEVLAAQQSP--ENPNWFQGTADAVRQYLWLFEE---HNVLEFLVLAGDH 204

Query: 225 LYRMNYMEFVQKHIDSKADITVSCIPMDDSRASDYGLMKIDDTGRIIQFAEKPKGSDLEA 284
           LYRM+Y  F+Q H ++ ADITV+ +PMD+ RA+ +GLMKID+ GRII+FAEKPKG  L+A
Sbjct: 205 LYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFAEKPKGEQLKA 264

Query: 285 MQVDTTVLGLSKQDAPRFPYIASMGVYVFKTEVLLKLLRWSYPSSNDFGSEIIPSAV-MH 343
           M+VDTT+LGL  + A   PYIASMG+YV   +V+L LLR  +P +NDFGSE+IP A  + 
Sbjct: 265 MKVDTTILGLDDERAKEMPYIASMGIYVVSKDVMLDLLRDQFPGANDFGSEVIPGATSLG 324

Query: 344 HNVQAYLFNDYWEDIGTIKSFFDANLSLAEQP-PKFEFYDSKTPFYTCPRFLPPTKVDKC 402
             VQAYL++ YWEDIGTI++F++ANL + ++P P F FYD  +P YT PR+LPP+K+   
Sbjct: 325 LRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSSPIYTQPRYLPPSKMLDA 384

Query: 403 KIVDAIISHGCFLQECSIQHSVVGVRSRLESGVELIDTMMMGADYYQTESEIASLLAEGK 462
            + D++I  GC ++ C I HSVVG+RS +  G  + DT++MGADYY+T+++   L+A+G 
Sbjct: 385 DVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLMAKGS 444

Query: 463 VPVGVGQNTKIRNCIIDKNAKIGRDVVITNADGVLEADRPEEGFYIRSGITAIPKDATIK 522
           VP+G+G+N+ I+  IIDKNA+IG +V I N+D V EA R  +G++I+SGI  + KDA + 
Sbjct: 445 VPIGIGKNSHIKRAIIDKNARIGDNVKIINSDNVQEAARETDGYFIKSGIVTVIKDALLP 504

Query: 523 DGTII 527
            GTII
Sbjct: 505 SGTII 509


>GSVIVT01038262001 assembled CDS
          Length = 476

 Score =  348 bits (894), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 185/489 (37%), Positives = 291/489 (59%), Gaps = 28/489 (5%)

Query: 43  NAKNLRTESNNNGIKKFKPGVAYSVFTSDVNKETATFETPVLETPTADPKKVASIILGGG 102
           ++ NLR +  + G K+     +  V  S  ++  A+   P      A+ + VA+I+ G G
Sbjct: 12  SSANLRPKLPSLGGKQATVPPSLCVSNSQQSEHPASLSRP------ANRQSVAAIVFGDG 65

Query: 103 AGTRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIKKIFILTQFNSCSLNRHLARTY 162
           + ++L+PLT +R++ AV I G YRLID  +SNCINS I KI+ LTQFNS SLN HL R Y
Sbjct: 66  SESQLYPLTKRRSEGAVHIAGSYRLIDAVVSNCINSNITKIYALTQFNSTSLNSHLCRAY 125

Query: 163 XXXXXXXXXXXXXXXLAATQTPGEAGKKWFQGTADAVRQFVWVFEDSKNKNVEHVIILSG 222
                          +AA Q+P   G  WFQGTADAVR+ +W+ E+     V   ++L G
Sbjct: 126 --------SGVGLEVVAAYQSPEARG--WFQGTADAVRRCLWLVEEHP---VAEFLVLPG 172

Query: 223 DHLYRMNYMEFVQKHIDSKADITVSCIPMDDSRASDYGLMKIDDTGRIIQFAEKPKGSDL 282
            HLYRM+Y + +Q H  SKADIT+  +  + SR +  G+++++   ++++F+++ +    
Sbjct: 173 YHLYRMDYQKLIQAHRQSKADITIVALSAEISRETGLGILEVNSENQVVEFSKRSEKE-- 230

Query: 283 EAMQVDTTVLGLSKQDAPRFPYIASMGVYVFKTEVLLKLLRWSYPSSNDFGSEIIPSAV- 341
            A  +  +  GLS   +    Y + MG+YV K E+++KLL   +P +N FGSE+IP A+ 
Sbjct: 231 PATIISVSYFGLSSSLS---QYFSGMGIYVVKKEIMIKLLSEHFPKANGFGSEVIPGAIS 287

Query: 342 MHHNVQAYLFNDYWEDIGTIKSFFDANLSLAEQPP-KFEFYDSKTPFYTCPRFLPPTKVD 400
           +   V+A+ F+ YWED+  I++F+ AN+ + ++    + FYD  +P YT PR LPPT + 
Sbjct: 288 IGMKVEAFAFDGYWEDMRNIEAFYQANMEITKKTDVGYNFYDRDSPLYTLPRNLPPTLIT 347

Query: 401 KCKIVDAIISHGCFLQECSIQHSVVGVRSRLESGVELIDTMMMGADYYQTESEIASLL-- 458
              I D+II  GC L  C I+ ++VG+R+++     + D+++MG+D YQ E E+   +  
Sbjct: 348 DAVITDSIIGDGCILDRCEIRGTIVGLRTKIGDRAVIEDSVIMGSDIYQPEDELRRDMKG 407

Query: 459 AEGKVPVGVGQNTKIRNCIIDKNAKIGRDVVITNADGVLEADRPEEGFYIRSGITAIPKD 518
               +P+G+G++T IR  I+DKNA+IG+ V+I N D V E +R   G+ I  GI  + K 
Sbjct: 408 TGNDIPIGIGEDTHIRKAIVDKNARIGKQVLIMNRDNVQEGNREAHGYTISEGIVVVLKG 467

Query: 519 ATIKDGTII 527
           A I DG+I+
Sbjct: 468 AVIPDGSIL 476