Jatropha Genome Database
- JcCA0029821.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0029821.20 + phase: 0 /partial
(116 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01025873001 assembled CDS 154 6e-39
GSVIVT01008455001 assembled CDS 93 2e-20
GSVIVT01009794001 assembled CDS 92 6e-20
GSVIVT01009792001 assembled CDS 84 2e-17
GSVIVT01032600001 assembled CDS 82 6e-17
GSVIVT01020089001 assembled CDS 81 9e-17
GSVIVT01018852001 assembled CDS 81 1e-16
GSVIVT01007337001 assembled CDS 76 4e-15
GSVIVT01012129001 assembled CDS 67 2e-12
GSVIVT01012130001 assembled CDS 67 2e-12
GSVIVT01010012001 assembled CDS 64 2e-11
GSVIVT01020537001 assembled CDS 59 4e-10
GSVIVT01033652001 assembled CDS 59 6e-10
GSVIVT01014360001 assembled CDS 57 1e-09
GSVIVT01014587001 assembled CDS 55 6e-09
GSVIVT01031727001 assembled CDS 51 1e-07
GSVIVT01016875001 assembled CDS 51 1e-07
GSVIVT01034548001 assembled CDS 49 3e-07
GSVIVT01019070001 assembled CDS 49 3e-07
GSVIVT01015214001 assembled CDS 49 5e-07
GSVIVT01031219001 assembled CDS 49 6e-07
GSVIVT01002064001 assembled CDS 47 2e-06
>GSVIVT01025873001 assembled CDS
Length = 139
Score = 154 bits (390), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 70/97 (72%), Positives = 80/97 (82%)
Query: 13 FVGSNVHLVTTNETWEQKLSEASRDGKTVLANFSATWCGPCRMIAPFYRELSEKYPSLMF 72
F NVHL+TT E WE+KL+EAS+DGK V+ANFSATWCGPC+MIAPFY ELSE +PSLMF
Sbjct: 21 FASGNVHLITTKENWEEKLAEASKDGKIVIANFSATWCGPCKMIAPFYCELSEAHPSLMF 80
Query: 73 LLVDVDELPDFSTSWDIKATPTFFFLEMGSNLTSLWG 109
L VDVDEL +FS+SWDIKATPTFFFL G + L G
Sbjct: 81 LTVDVDELSEFSSSWDIKATPTFFFLRDGQQVDKLVG 117
>GSVIVT01008455001 assembled CDS
Length = 348
Score = 93.2 bits (230), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 63/111 (56%)
Query: 6 DADEHVEFVGSNVHLVTTNETWEQKLSEASRDGKTVLANFSATWCGPCRMIAPFYRELSE 65
D++ F V + ++ E KL AS+ + + F+ATWCGPCR I+P + LS
Sbjct: 228 DSEAAAAFKDGQVMAIHSSSELETKLKAASKTSRLAILYFTATWCGPCRYISPVFTSLSG 287
Query: 66 KYPSLMFLLVDVDELPDFSTSWDIKATPTFFFLEMGSNLTSLWGQQAGATE 116
KYP ++FL VD+D D + SW++ + PTFFF++ G + + G A E
Sbjct: 288 KYPKVVFLKVDIDGAQDVAVSWNVSSVPTFFFIKNGKEIDKVVGVDKSALE 338
>GSVIVT01009794001 assembled CDS
Length = 114
Score = 91.7 bits (226), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 60/87 (68%)
Query: 25 ETWEQKLSEASRDGKTVLANFSATWCGPCRMIAPFYRELSEKYPSLMFLLVDVDELPDFS 84
E+W+++ K V+ +F+A+WCGPCR+I+PF EL++K P+++FL VDVDEL +
Sbjct: 14 ESWKEQFQHGIESKKLVVVDFTASWCGPCRVISPFLAELAKKMPNVIFLKVDVDELETVA 73
Query: 85 TSWDIKATPTFFFLEMGSNLTSLWGQQ 111
W+++A PTF FL+ G+ + + G +
Sbjct: 74 KEWEVEAMPTFLFLKEGNVVDKVVGAK 100
>GSVIVT01009792001 assembled CDS
Length = 109
Score = 83.6 bits (205), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 53/71 (74%)
Query: 41 VLANFSATWCGPCRMIAPFYRELSEKYPSLMFLLVDVDELPDFSTSWDIKATPTFFFLEM 100
V+ +F+A+WCGPCR+I+PF EL++K P+++FL VDVDEL + W+++A PTF FL+
Sbjct: 25 VVVDFTASWCGPCRVISPFLAELAKKMPNVIFLKVDVDELETVAKEWEVEAMPTFLFLKE 84
Query: 101 GSNLTSLWGQQ 111
G+ + + G +
Sbjct: 85 GNVVDKVVGAK 95
>GSVIVT01032600001 assembled CDS
Length = 136
Score = 82.0 bits (201), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 ADDADEHVEFVGSNVHLVTTNETWEQKLSEASRDGKTVLANFSATWCGPCRMIAPFYREL 63
AD +D +E GS V++ ++E W + + + ++ +F+ATWCGPC+ + P + +
Sbjct: 14 ADASDSTLE--GSGVNVFHSSERWLLHFNASKESNQLMVIDFAATWCGPCKFMEPAVKSM 71
Query: 64 SEKYPSLMFLLVDVDELPDFSTSWDIKATPTFFFLEMGSNLTSLWGQQ 111
+ KY + F+ +DVDELPD + + ++A PTF L+ G L + G +
Sbjct: 72 ASKYTDVDFVKIDVDELPDVAQEFTVQAMPTFVLLKKGKELERVIGAK 119
>GSVIVT01020089001 assembled CDS
Length = 121
Score = 81.3 bits (199), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%)
Query: 23 TNETWEQKLSEASRDGKTVLANFSATWCGPCRMIAPFYRELSEKYPSLMFLLVDVDELPD 82
++ +W+ EA GK ++ +FSATWCGPCR + P E +EKY + F+ +DVDEL D
Sbjct: 19 SSASWKIHFEEAKSTGKLMVIDFSATWCGPCRFMEPVINEFAEKYTDVEFVKIDVDELSD 78
Query: 83 FSTSWDIKATPTFFFLEMGSNLTSLWGQQ 111
+ + ++ PTF ++ G+ + + G +
Sbjct: 79 VAQEFGVQGMPTFLLIKRGTEVDKVVGAK 107
>GSVIVT01018852001 assembled CDS
Length = 152
Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%)
Query: 41 VLANFSATWCGPCRMIAPFYRELSEKYPSLMFLLVDVDELPDFSTSWDIKATPTFFFLEM 100
++ +F+A+WCGPCR I PF EL++K P++ FL VDVDEL +T W ++A PTF FL+
Sbjct: 67 IVVDFTASWCGPCRFITPFLVELAKKIPTVTFLKVDVDELKSVATDWAVEAMPTFMFLKQ 126
Query: 101 GSNLTSLWG 109
G + + G
Sbjct: 127 GKIVDKVVG 135
>GSVIVT01007337001 assembled CDS
Length = 126
Score = 75.9 bits (185), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 16 SNVHLVTTNETWEQKLSEASRDGKTVLANFSATWCGPCRMIAPFYRELSEKYPSLMFLLV 75
S V V + E+W+ +S+A+ G V+ +F+A WC P + F+ EL+ YP +FL V
Sbjct: 11 SRVIKVVSEESWDFYISQATTQGCPVVVHFTAAWCIPSVAMNQFFEELASNYPDALFLTV 70
Query: 76 DVDELPDFSTSWDIKATPTFFFLEMGSNLTSLWG 109
DVDE+ + ++KA PTF ++ G+ + L G
Sbjct: 71 DVDEVKAVAVKMEVKAMPTFLLMKEGAQVDRLVG 104
>GSVIVT01012129001 assembled CDS
Length = 208
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 16 SNVHLVTTNETWEQKLSEASRDGKTVLANFSATWCGPCRMIAPFYRELSEKYPSLMFLLV 75
S + L+ + E + LS+ + + F+A WCGPCR IAP ELSEKYP + +
Sbjct: 96 SKIALIKSEEEFNTSLSKVQDESLPAIFYFTAVWCGPCRFIAPIIAELSEKYPHVTTYKI 155
Query: 76 DVDE--LPDFSTSWDIKATPTFFFLEMGSNLTSLWG 109
D+D+ L + +I + PT F + G + G
Sbjct: 156 DIDQDGLENTLRRLNIASVPTLHFFQNGKKAAEIIG 191
>GSVIVT01012130001 assembled CDS
Length = 186
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 16 SNVHLVTTNETWEQKLSEASRDGKTVLANFSATWCGPCRMIAPFYRELSEKYPSLMFLLV 75
S + L+ + E + LS+ + + F+A WCGPCR IAP ELSEKYP + +
Sbjct: 74 SKIALIKSEEEFNTSLSKVQDESLPAIFYFTAVWCGPCRFIAPIIAELSEKYPHVTTYKI 133
Query: 76 DVDE--LPDFSTSWDIKATPTFFFLEMGSNLTSLWG 109
D+D+ L + +I + PT F + G + G
Sbjct: 134 DIDQDGLENTLRRLNIASVPTLHFFQNGKKAAEIIG 169
>GSVIVT01010012001 assembled CDS
Length = 183
Score = 63.5 bits (153), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 41 VLANFSATWCGPCRMIAPFYRELSEKYP-SLMFLLVDVDELPDFSTSWDIKATPTFFFLE 99
VL F A WCGPCRMIAP EL+++Y ++ V+ D+ P+ +T + I++ PT F +
Sbjct: 97 VLVEFWAPWCGPCRMIAPVIDELAKEYAGKIVCCKVNTDDCPNIATQYGIRSIPTVLFFK 156
Query: 100 MGSNLTSLWGQQAGAT 115
G S+ G +T
Sbjct: 157 NGERKESVIGAVPKST 172
>GSVIVT01020537001 assembled CDS
Length = 163
Score = 58.9 bits (141), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 21 VTTNETWEQKLSEASRDGKTVLANFSATWCGPCRMIAPFYRELSEKYP-SLMFLLVDVDE 79
+ T+ TW+ + +A+ VL F A WCGPCR+I P ELSE+Y L F ++ D+
Sbjct: 62 IVTDTTWQSLVLKAT---GPVLVEFWAPWCGPCRIIHPVVAELSEEYAGKLKFFKLNTDD 118
Query: 80 LPDFSTSWDIKATPTFFFLEMGSNLTSLWG 109
P +T + I++ PT G ++ G
Sbjct: 119 SPSIATQYGIRSVPTTMIFINGEKKDAVLG 148
>GSVIVT01033652001 assembled CDS
Length = 124
Score = 58.5 bits (140), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 17 NVHLVTTNETWEQKLSEASRDGKT----VLANFSATWCGPCRMIAPFYRELSEKYPSLMF 72
N H T+ + +Q L+ K+ + N+ +TWC C I P + +LS +P L F
Sbjct: 16 NRHGNLTSASNDQDLTNVLHQIKSSKSPAVINYGSTWCRVCNQILPAFCQLSNNFPKLSF 75
Query: 73 LLVDVDELPDFSTSWDIKATPTFFFLEMGSNLTSLWG 109
+ D+DE P+ T+ I+ TPTF F G + + G
Sbjct: 76 IYADIDECPE--TTQHIRYTPTFHFYRDGERVDEMLG 110
>GSVIVT01014360001 assembled CDS
Length = 188
Score = 57.4 bits (137), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 24 NETWEQKLSEASRDGKTVLANFSATWCGPCRMIAPFYRELSEKYP-SLMFLLVDVDELPD 82
+ TW+ + +A VL F A WCGPCRMI P EL+++Y L V+ DE P
Sbjct: 90 DATWQSLVLDADTP---VLVEFWAPWCGPCRMIHPVINELAKQYTGKLKCYKVNTDESPS 146
Query: 83 FSTSWDIKATPTFFFLEMGSNLTSLWGQQAGAT 115
+T + I++ PT + G ++ G +T
Sbjct: 147 IATRYGIRSIPTVIIFKSGEKKEAIIGAVPKST 179
>GSVIVT01014587001 assembled CDS
Length = 126
Score = 55.5 bits (132), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%)
Query: 16 SNVHLVTTNETWEQKLSEASRDGKTVLANFSATWCGPCRMIAPFYRELSEKYPSLMFLLV 75
S V V + E+W+ S+A+ G V+ +F+A WC P + + +L+ Y ++FL+V
Sbjct: 10 SRVVKVDSEESWDLFFSQATNQGCPVVVHFTAAWCIPSVAMTAVFEDLALNYQDMLFLVV 69
Query: 76 DVDELPDFSTSWDIKATPTFFFLEMGSNLTSLWG 109
DVDE+ + ++ +IKA PTF + G+ + L G
Sbjct: 70 DVDEVKEVASKLEIKAMPTFLLMREGAQVDKLVG 103
>GSVIVT01031727001 assembled CDS
Length = 245
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 21 VTTNETWEQKLSEASRDGKTVLANFSATWCGPCRMIAPFYRELSEKYP-SLMFLLVDVDE 79
V T ++WE+ + + VL F A+WCGPCRM+ E++E Y L +++ D
Sbjct: 142 VVTGDSWEKSILNSE---IPVLVEFYASWCGPCRMVHRVIDEIAEDYAGRLKCFVLNTDH 198
Query: 80 LPDFSTSWDIKATPTFFFLEMGSNLTSLWG 109
+ +++IKA P + G S+ G
Sbjct: 199 DLHIAENYEIKAVPVVLLFKNGEKRESVVG 228
>GSVIVT01016875001 assembled CDS
Length = 216
Score = 50.8 bits (120), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 25 ETWEQKLSEASRDG-KTVLANFSATWCGPCRMIAPFYRELSEKYPSLMFLLVDVDELPDF 83
+ ++ LS S+ G K V+ F TWC CR + P + ++ YP+++FL V+ DE
Sbjct: 92 HSMQEFLSALSQAGDKLVIVEFYGTWCASCRALFPKLCKTAQDYPNIIFLKVNFDENKSM 151
Query: 84 STSWDIKATPTFFF 97
S ++K P F F
Sbjct: 152 CKSLNVKMLPCFHF 165
>GSVIVT01034548001 assembled CDS
Length = 175
Score = 49.3 bits (116), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 39 KTVLANFSATWCGPCRMIAPFYRELSEKYP-SLMFLLVDVDELPDFSTSWDIKATPTFFF 97
K VL +F ATWCGPC+ + P E+ + + +D ++ P + + I+A PTF
Sbjct: 85 KPVLVDFYATWCGPCQFMVPILNEVGASLKDKIQVVKIDTEKYPSIADKYRIEALPTFII 144
Query: 98 LEMGS 102
+ G
Sbjct: 145 FKDGK 149
>GSVIVT01019070001 assembled CDS
Length = 172
Score = 49.3 bits (116), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 39 KTVLANFSATWCGPCRMIAPFYRELSEKYPSLMFLLVDVDE-LPDFSTSWDIKATPTFFF 97
K V+ + WCGPC+++AP ++ELS KY ++FL +D ++ + I+ PTF
Sbjct: 85 KAVVLDMYTQWCGPCKVMAPKFQELSGKYLDVVFLKLDCNQDNKTLAKELGIRVVPTFKI 144
Query: 98 LEMGSNLTSLWGQQ 111
L+ + + G +
Sbjct: 145 LKDSKIVKEVTGAK 158
>GSVIVT01015214001 assembled CDS
Length = 207
Score = 48.9 bits (115), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 15 GSNVHLVTTNETWEQKLSEASRDGKTVLANFSATWCGPCRMIAPFYRELSEKYPSLMFLL 74
G N+ + + + + LS+A K V+ F TWC CR + P +E++P ++FL
Sbjct: 78 GPNMIDIHSTQEFLGALSQAG--DKLVIVEFYGTWCASCRALFPKLCRTAEEHPEILFLK 135
Query: 75 VDVDELPDFSTSWDIKATPTFFF 97
V+ DE + ++K P F F
Sbjct: 136 VNFDENKPMCKNLNVKVLPYFHF 158
>GSVIVT01031219001 assembled CDS
Length = 357
Score = 48.5 bits (114), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 18/116 (15%)
Query: 2 QGADDADEHVEFV----GSNVHL--------VTTNETWEQKLSEASRDGKTVLANFSATW 49
+GA A+ EFV G+NV + V T++++++ + +D VL F A W
Sbjct: 113 EGARSAEALAEFVNNEGGTNVKIAAVPSNVVVLTSDSFDEVVLNEKKD---VLVEFYAPW 169
Query: 50 CGPCRMIAPFYRELSEKYPS---LMFLLVDVDELPDFSTSWDIKATPTFFFLEMGS 102
CG C+ +AP Y +++ + S ++ +D D+ D + + + PT F G+
Sbjct: 170 CGHCKSLAPIYEKVATAFKSEGDVVIANLDADKYKDLAEKYGVSGYPTLKFFPKGN 225
>GSVIVT01002064001 assembled CDS
Length = 85
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 28 EQKLSEASRDGKTVLANFSATWCGPCRMIAPFYRELSEKYPSLMFLLVDVDELPDFSTSW 87
+++L R G V+ +F A+WC + + + LS +P +F V+ +E P S ++
Sbjct: 11 KEELDNVVRQGAPVILHFWASWCEASKHMDQVFSHLSTDFPHAVFFRVEAEEQPVISEAY 70
Query: 88 DIKATPTFFFLE 99
+ A P F F +
Sbjct: 71 SVSAVPYFVFFK 82