Jatropha Genome Database

JcCA0029141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0029141.10 - phase: 0 /partial
         (635 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01021404001 assembled CDS                                       925   0.0  
GSVIVT01032233001 assembled CDS                                       174   8e-44
GSVIVT01003706001 assembled CDS                                       171   8e-43
GSVIVT01012723001 assembled CDS                                       157   1e-38
GSVIVT01011429001 assembled CDS                                        65   8e-11
GSVIVT01019680001 assembled CDS                                        57   2e-08
GSVIVT01027437001 assembled CDS                                        51   1e-06

>GSVIVT01021404001 assembled CDS
          Length = 1011

 Score =  925 bits (2391), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/628 (70%), Positives = 525/628 (83%), Gaps = 19/628 (3%)

Query: 18  SIPDEMKPSGLKIEGGEQFSHVRLEDLIGMIRNAEKNILLLNQARVHALEDLERILAEKE 77
           ++ +EM P G+ ++ GEQ S  +LEDL+GM++NAEKNILLLNQARV AL+DLE+IL EK+
Sbjct: 120 TVSEEMTPLGINVKSGEQLSSFQLEDLVGMLKNAEKNILLLNQARVRALQDLEKILTEKD 179

Query: 78  ILQGEINVLEMRLAETDARMKVAAQEKIHVELMGDQLEKLKNELTYRG----------EN 127
            LQGEIN+LEMRLAET+AR+KVAAQEKIHVE++ +QL  L+NEL++RG          EN
Sbjct: 180 ALQGEINILEMRLAETNARIKVAAQEKIHVEILEEQLVNLRNELSHRGVTEGSGADMHEN 239

Query: 128 QDKLLNEEPSLLQNSSVDYLSEELNLLRAENSSLKNDMEALKRELSDVKDTDERVITLEK 187
            +K  +          V  L +EL+LLR EN SLK+D+ ALK ELS V+ TD+RV+ LEK
Sbjct: 240 WNKAFD---------GVHSLGKELSLLRTENVSLKDDILALKEELSHVQKTDKRVVMLEK 290

Query: 188 ERXXXXXXXXXXXXXXXTSQEDVSKLSSLKVECKDLWEKVENLQALLEKATKQADQAILV 247
           ER                SQEDVSKLS+LK ECK+LW++VENLQ LL++AT QAD+AILV
Sbjct: 291 ERSFLESALKELEFKLVASQEDVSKLSTLKFECKNLWDRVENLQVLLDRATDQADKAILV 350

Query: 248 LQQNQELRKKVDKLEESLEEANVYKLSSEKLQQSNELMQQKIKLLEERLQRSDEEIGSYV 307
           L+QNQELRKKVD LEESLEEANVYKLSSEK+QQ N+LMQ+KIKLLEERL RSDEEI SYV
Sbjct: 351 LEQNQELRKKVDMLEESLEEANVYKLSSEKMQQYNDLMQKKIKLLEERLDRSDEEILSYV 410

Query: 308 QVYQESVQEFQDTLNTLKEQSKKKALDQPVDDMPWEFWSRLLLMIDGWVLEEKLSKENAK 367
           ++YQES++EFQDTLN LKE+SK++AL++PVDDMPW+FWSRLLL+IDGW+LE+K+S  +AK
Sbjct: 411 KLYQESIKEFQDTLNNLKEESKRRALNEPVDDMPWDFWSRLLLIIDGWLLEKKISANDAK 470

Query: 368 LLRDMVWKRDRRVCDAYLECREKNDREAVSTFLKLTSSPASSGLHVIHIAAEMAPVAKXX 427
           LLR+MVWKRD R+ DAYL C++ N+ EAV+ FLKLTSSP  S LHVIHIAAEMAPVAK  
Sbjct: 471 LLREMVWKRDGRIRDAYLVCKDTNEHEAVAIFLKLTSSPKRSRLHVIHIAAEMAPVAKVG 530

Query: 428 XXXXXXXXXXKALQKRGHLVEIILPKYDCMQYDGIGNLRALDVVVESYFDGKLYKNKIWV 487
                     +ALQK+GHLVEI+LPKYDCMQYD I +LR LD+ +ESYFDG+L++NK+WV
Sbjct: 531 GLGDVVSGLSRALQKKGHLVEIVLPKYDCMQYDRIRDLRVLDMELESYFDGRLFRNKVWV 590

Query: 488 GTIEGLPVYFIEPHHPNKFFWRGQFYGEHDDFKRFSFFSRAALELLLQAGKKPDIIHCHD 547
           GT+EGLPVYFIEPHHP+KFFWRG  YGEHDDF+RFS+FSRAALELLLQAGKKPDIIHCHD
Sbjct: 591 GTVEGLPVYFIEPHHPSKFFWRGTVYGEHDDFRRFSYFSRAALELLLQAGKKPDIIHCHD 650

Query: 548 WQTAFVAPLYWDIYAPKGLNSARICFTCHNFEYQGTAPASELVSCGLDVQELNRPDRMQD 607
           WQTAFVAPLYWD+YAPKGLNSARICFTCHNFEYQGTAPASE+ SCGLDV  LNRPDRMQD
Sbjct: 651 WQTAFVAPLYWDLYAPKGLNSARICFTCHNFEYQGTAPASEMASCGLDVHHLNRPDRMQD 710

Query: 608 NSAHDRINPVKGAVVFSNIVTTVSPTYA 635
           NSAHDR+NPVKGA+VFSNIVTTVSPTYA
Sbjct: 711 NSAHDRVNPVKGAIVFSNIVTTVSPTYA 738


>GSVIVT01032233001 assembled CDS
          Length = 608

 Score =  174 bits (442), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 131/230 (56%), Gaps = 10/230 (4%)

Query: 411 LHVIHIAAEMAPVAKXXXXXXXXXXXXKALQKRGHLVEIILPKYDCMQYDGIGNLRALDV 470
           +H+IH+ AEMAP+AK            +A   R H V+I+LP Y+C+Q + I  L  L  
Sbjct: 108 MHIIHVTAEMAPIAKVGGLGDVVTGLARACLSRAHKVDIMLPFYECIQREQISELE-LIT 166

Query: 471 VVESYFDGKLYKNKIWVGTIEGLPVYFIEPHHPNKFFWRGQFY--GEHDDFKRFSFFSRA 528
             ESY+DG       + G + G+PV FI+P   + +F++GQ+   G +++ + + +FSRA
Sbjct: 167 TYESYYDGNWVPTNAYRGVVSGIPVIFIQP---SNYFFKGQYVYGGSYNELEAYLYFSRA 223

Query: 529 ALELLLQAGKKPDIIHCHDWQTAFVAPLYWDIYAPKGLNSARICFTCHNFEYQGTAPASE 588
            LE +   G +PDIIH H+WQT  +  LYWD+Y    L   RI  T HN E+ G     E
Sbjct: 224 CLEWMQVTGTQPDIIHIHEWQTGSLPLLYWDMYHYLSLKKPRIVLTIHNMEHYGECRKEE 283

Query: 589 LVSCGLDVQELNRPDRMQDNS--AHD--RINPVKGAVVFSNIVTTVSPTY 634
           L  CGLD       D+  D+    H+  R++ +KG +V+SN+V TVSPTY
Sbjct: 284 LSKCGLDGSIYATLDKAVDDRTIGHNPERLSLLKGGIVYSNVVITVSPTY 333


>GSVIVT01003706001 assembled CDS
          Length = 769

 Score =  171 bits (434), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 125/213 (58%), Gaps = 12/213 (5%)

Query: 379 RVCDAYLECREKNDREAVSTFLKLTSSPAS--SGLHVIHIAAEMAPVAKXXXXXXXXXXX 436
           RV    + C  KND        +L  +P+   +G H++HI  EM PV             
Sbjct: 25  RVKPRTVRCLRKNDEVN-----RLFEAPSQMENGFHIVHICTEMVPVVSVGSLASYVTGL 79

Query: 437 XKALQKRGHLVEIILPKYDCMQYDGIGNLRALDVVVESYFDGKLYKNKIWVGTIEGLPVY 496
             ALQ++G+LVE+ILPKY  +  D +  LR ++    SYF+G+L  N+IW G + G+ V 
Sbjct: 80  SHALQRQGNLVEVILPKYASLDLDEVQGLREIEAEFYSYFNGQLQGNRIWTGVVYGIGVT 139

Query: 497 FIEPHHPNKFFWRGQFYGEHDDFKRFSFFSRAALELLLQAGKKPDIIHCHDWQTAFVAPL 556
           FI+P H + FF R + YG  DDF+RFS+FSRA+L+ ++++GK+PD++H H+W+TA V PL
Sbjct: 140 FIQPVHYSTFFTRERLYGYPDDFERFSYFSRASLDYIVKSGKQPDVLHIHNWETAIVGPL 199

Query: 557 YWDIYAPKGLNSARICFTCHNFEYQGTAPASEL 589
           +WD++  +     RI F C        +P SE+
Sbjct: 200 FWDVFVKQ--VQLRIKFIC---SIHSGSPFSEI 227


>GSVIVT01012723001 assembled CDS
          Length = 1046

 Score =  157 bits (398), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 82/195 (42%), Positives = 110/195 (56%), Gaps = 10/195 (5%)

Query: 396 VSTFLKLTSSPASSGLHVIHIAAEMAPVAKXXXXXXXXXXXXKALQKRGHLVEIILPKYD 455
           +  F  +   P    +H++HIA EMAP+AK            +A+Q+  H V+IILPKYD
Sbjct: 586 IPVFGSVVKEPP---MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQELNHHVDIILPKYD 642

Query: 456 CMQYDGIGNLRALDVVVESYFDGKLYKNKIWVGTIEGLPVYFIEPHHPNKFFWRGQFYGE 515
           C+    + + +        YF G   + K+W G +EGL VYF+EP   N FF  G  YG 
Sbjct: 643 CLNLSNVKDFQ----YKRCYFWGGT-EIKVWFGKVEGLSVYFLEPQ--NGFFSAGCIYGC 695

Query: 516 HDDFKRFSFFSRAALELLLQAGKKPDIIHCHDWQTAFVAPLYWDIYAPKGLNSARICFTC 575
            +D +RF FF  AALE LLQ+G  PDIIHCHDW +A V+ L+ D Y   GL+ AR+ FT 
Sbjct: 696 RNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVSWLFKDHYKHYGLSKARVVFTI 755

Query: 576 HNFEYQGTAPASELV 590
           HN E+     A  +V
Sbjct: 756 HNLEFGAPLIAKAMV 770


>GSVIVT01011429001 assembled CDS
          Length = 788

 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 108/268 (40%), Gaps = 30/268 (11%)

Query: 385 LECREKNDREAVSTFLKLTSSP--ASSGLHVIHIAAEMAPVAKXXXXXXXXXXXXKALQK 442
           L   E N+  AVS    +   P   ++ +++I +AAE AP +K            KAL +
Sbjct: 286 LSSEEVNNEAAVSMGEDVKPPPLAGTNVMNIILVAAECAPWSKTGGLGDVAGALPKALAR 345

Query: 443 RGHLVEIILPKYDCMQYDGIGNL-RALDVVVESYF--DGKLYKNKIWVGTIEGLPVYFIE 499
           RGH V ++ P+Y        GN   A +  V   +  DG+  +   +   I+G+   FI+
Sbjct: 346 RGHRVMVVAPRY--------GNYAEAQETGVRKKYKVDGQDMEVTYFQAYIDGVDFVFID 397

Query: 500 PH---HPNKFFWRGQFYGEHDDFKRFSFFSRAALELLLQA-------GKKPDIIHCHDWQ 549
            H   H  K  + G      D  KR   F +AA+E+           G    +   +DW 
Sbjct: 398 SHMFRHIEKNIYGGN---RMDILKRMVLFCKAAIEVPWHVPCGGVCYGDGNLVFIANDWH 454

Query: 550 TAFVAPLYWDIYAPKG--LNSARICFTCHNFEYQGTAPASELVSCGLDVQELNRPDRMQD 607
           TA + P+Y   Y      +   R     HN  +QG  P  +    GL    L+   ++ D
Sbjct: 455 TALL-PVYLKAYYRDNGLMQYTRSALVIHNIAHQGRGPVEDFSYTGLPEHYLDL-FKLYD 512

Query: 608 NSAHDRINPVKGAVVFSNIVTTVSPTYA 635
               +  N     +  ++ V TVS  YA
Sbjct: 513 PVGGEHFNIFAAGLKTADRVVTVSHGYA 540


>GSVIVT01019680001 assembled CDS
          Length = 659

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 112/264 (42%), Gaps = 55/264 (20%)

Query: 409 SGLHVIHIAAEMAPVAKXXXXXXXXXXXXKALQKRGHLVEIILPKYDCMQYDGIGNLRAL 468
           SG++++ +  E+ P +K             A+  RGH V  + P+YD  QY       A 
Sbjct: 131 SGMNLVFVGCEVGPWSKTGGLGDVLGGLPPAMAARGHRVMSVSPRYD--QYK-----DAW 183

Query: 469 D--VVVESYFDGKLYKNKIWVGTIEGLPVYFIEPHHP---NKFFWR--GQFYGEH----- 516
           D  VVVE     ++   + +     G+   F++  HP    K + +   + YG       
Sbjct: 184 DTCVVVEIPVGDRIETVRFFHCYKRGVDRVFVD--HPWFLEKVWGKTGSKIYGPSAGVDY 241

Query: 517 -DDFKRFSFFSRAALE----LLLQAGK------KPDIIH-CHDWQTAFVAPLYWDIYAPK 564
            D+  RFS F +A LE    L L + K        D++   +DW TA +      +Y   
Sbjct: 242 IDNQMRFSLFCQAVLEAPRILNLNSSKYFSGPYGEDVVFIANDWHTAILPCYLKSMYQSS 301

Query: 565 GL-NSARICFTCHNFEYQGTAPASELVSCGLDVQELNRPDRMQDNSAHD----------- 612
           G+  +A++ F  HN  YQG    S       D   LN PDR +  S+ D           
Sbjct: 302 GIYRNAKVVFCIHNIAYQGRFAFS-------DFGFLNLPDRFK--SSFDFMDGYKKPVKG 352

Query: 613 -RINPVKGAVVFSNIVTTVSPTYA 635
            +IN +K  ++ ++ V TVSP YA
Sbjct: 353 RKINWMKAGILEADRVVTVSPYYA 376


>GSVIVT01027437001 assembled CDS
          Length = 614

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 108/266 (40%), Gaps = 55/266 (20%)

Query: 407 ASSGLHVIHIAAEMAPVAKXXXXXXXXXXXXKALQKRGHLVEIILPKYDCMQYDGIGNLR 466
              G+ +I +  E+ P +K             A+   GH V  + P++D  QY    +  
Sbjct: 84  CGCGMSLIFVGTEVGPWSKTGGLGDVLGGLPPAMSANGHRVMTVSPRFD--QYK---DAW 138

Query: 467 ALDVVVESYFDGKLYKNKIWVGTIEGLPVYFIEPHHP-----------NKFFWRGQFYGE 515
              V V+     +  K + +     G+   F++  HP           +K +  G   GE
Sbjct: 139 DTGVTVQLNVGDRFEKVRFFHCYKRGVDRVFVD--HPWFLEKVWGKTGSKLY--GPLAGE 194

Query: 516 --HDDFKRFSFFSRAALE----LLLQAGK------KPDIIH-CHDWQTAFVAPLYWDIYA 562
              D+  RFS   +AALE    L L++ K        D++   +DW TA +A     +Y 
Sbjct: 195 DFQDNQLRFSLLCQAALEAPRILNLKSSKYFSGPYGEDVVFIANDWHTAPLACYLKTMYR 254

Query: 563 PKG-LNSARICFTCHNFEYQGTAPASELVSCGLDVQELNRPDRMQDNSAHD--------- 612
            KG   +A++ F  HN  YQG    +       D   LN PD  +  S+ D         
Sbjct: 255 LKGRYGNAKVVFCIHNIAYQGRFAFA-------DFSLLNLPDEFK--SSFDFTDGYEKPV 305

Query: 613 ---RINPVKGAVVFSNIVTTVSPTYA 635
              +IN +K  ++ ++ V TVSP YA
Sbjct: 306 KGRKINWMKAGILEADKVLTVSPYYA 331