Jatropha Genome Database
- JcCA0018861.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0018861.10 - phase: 0 /pseudo/partial
(748 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01035095001 assembled CDS 1024 0.0
GSVIVT01019879001 assembled CDS 95 1e-19
GSVIVT01023350001 assembled CDS 91 2e-18
GSVIVT01027587001 assembled CDS 86 5e-17
GSVIVT01008734001 assembled CDS 86 6e-17
GSVIVT01016876001 assembled CDS 86 7e-17
GSVIVT01005195001 assembled CDS 85 1e-16
GSVIVT01035853001 assembled CDS 84 3e-16
GSVIVT01015542001 assembled CDS 72 8e-13
>GSVIVT01035095001 assembled CDS
Length = 1121
Score = 1024 bits (2647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/675 (74%), Positives = 541/675 (80%), Gaps = 59/675 (8%)
Query: 103 NDESSKNRDVPSSAALPVIRPALGRQYSMSDRAKVAMQEYLNHFLGNLDIVNSREVCKFL 162
+DES KNRD+PSSAALP+IRPALGRQ S+SDRAKVAMQ YLN FLGNLDIVNSREVCKFL
Sbjct: 159 HDESVKNRDIPSSAALPIIRPALGRQNSVSDRAKVAMQGYLNLFLGNLDIVNSREVCKFL 218
Query: 163 EVSKLSFSPEYGPKLKEDYVMARHLPKLPSNDDSGKCCACHWFSCCNDNWQKVWAVLKPG 222
EVSKLSFSPEYGPKLKEDYVM +HLPK+P DD+ KCC C WFSCCNDNWQKVWAVLKPG
Sbjct: 219 EVSKLSFSPEYGPKLKEDYVMVKHLPKIPKEDDTRKCCPCPWFSCCNDNWQKVWAVLKPG 278
Query: 223 FLALLADPFDAKPLDIIVFDVLPASDGSGEGRIALAVETKERNPLRHAFKVVCGVRSIKL 282
FLALL DPF +PLDIIVFD+LPASDG+GEGR++LA E KERNPLRHA KV CG RSI+L
Sbjct: 279 FLALLEDPFHPQPLDIIVFDLLPASDGNGEGRLSLAKEIKERNPLRHALKVTCGNRSIRL 338
Query: 283 RTKNGARVKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLTEDGSQAQWFIDGSAAFNA 342
R K+ A+VKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGL+EDGS AQWF+DG AAF A
Sbjct: 339 RAKSSAKVKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLSEDGSLAQWFVDGRAAFEA 398
Query: 343 IASSIEDAKSEIFICGWWLCPELYLRRPFHAHASSRLDALLEAKAKQGVQIYILLYKEVA 402
IAS+IE+AKSEIFICGWW+CPELYLRRPFH+HASSRLDALLEAKAKQGVQIYILLYKEVA
Sbjct: 399 IASAIEEAKSEIFICGWWVCPELYLRRPFHSHASSRLDALLEAKAKQGVQIYILLYKEVA 458
Query: 403 LALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHHICFIGGLDLCF 462
LALKINSVYSKRKLLSIHENVRVLRYPDHFS+GVYLWSHHEKLVIVD+ ICFIGGLDLCF
Sbjct: 459 LALKINSVYSKRKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIVDYQICFIGGLDLCF 518
Query: 463 GRYDTREHRVGDCPPLLWPGKDYYNPR--------------------ESEPNSWEDTMKD 502
GRYDT EH+VGD PPL+WPGKDYYNPR ESEPNSWEDTMKD
Sbjct: 519 GRYDTLEHKVGDHPPLMWPGKDYYNPRQFKLRLSFPCKHMGDKLHSLESEPNSWEDTMKD 578
Query: 503 ELDRRKYPRMPWHDVHCALWGPSCRDIARHFVQRWNYAKRNKAPYEEAIPLLMPQQHMVI 562
ELDR KYPRMPWHDVHCALWGP CRD+ARHFVQRWNYAKRNKAP E+AIPLLMPQQHMVI
Sbjct: 579 ELDRGKYPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPNEQAIPLLMPQQHMVI 638
Query: 563 PHYRGSSRELEAEITDVEDDSKVIKXXXXXXXXXXXXXIPLLLPQEAEGLDDSDGGPKLN 622
PHY G SRE+E E +VE++ K IK IPLLLPQE +GLD G KLN
Sbjct: 639 PHYMGRSREMEVEKKNVENNYKDIKKLDSFSSRSSFQDIPLLLPQEPDGLDSPHGESKLN 698
Query: 623 GLDSPPG---------RSLSLAFRKSKTDHVGADMPMKGFVDDHSVLDLHAKMASDLLPQ 673
G DS RSLS +FRKSK +
Sbjct: 699 GFDSSSNLLDQPTRVSRSLSFSFRKSKIE------------------------------P 728
Query: 674 NGTKTSDLDWWETQERGDQVGFQDETGQVGPRTSCRCQVIRSVSQWSAGTSQVEESIHCA 733
G +T D +WWETQERG+QV DETGQVGP CRCQVIRSVSQWSAGTSQVE+S H A
Sbjct: 729 PGMRTCDREWWETQERGNQVLSADETGQVGPCVPCRCQVIRSVSQWSAGTSQVEDSTHNA 788
Query: 734 YRSLIEKAEHFIYIE 748
Y SLIEKAEHFIYIE
Sbjct: 789 YCSLIEKAEHFIYIE 803
>GSVIVT01019879001 assembled CDS
Length = 839
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 40/226 (17%)
Query: 343 IASSIEDAKSEIFICGWWLCPELYLRRPFHAHASSRLDALLEAKAKQGVQIYILLYKEVA 402
I +I A+ I+I GW + + L R L LL+ K+++GV++ +L++ +
Sbjct: 241 IFQAISQARRLIYITGWSVYHSVRLIRDTDNSTEFMLGHLLKTKSQEGVRVLLLVWDDPT 300
Query: 403 ----LALKINSVYSK-----RKLLSIHENVRVLRYPDHFSSG---------VYLWSHHEK 444
L K + + R+ H +V+VL P G +++HH+K
Sbjct: 301 SRSILGYKTDGIMQTYDEETRRFFK-HSSVQVLLCPRSAGKGHSWIKQQEVGTIYTHHQK 359
Query: 445 LVIVD----HH----ICFIGGLDLCFGRYDTREHRVGDCPPLLWPGKDYYNPRESEPNSW 496
VIVD H+ I FIGGLDLC GRYDT +H + + DY+NP + P +
Sbjct: 360 TVIVDADAGHYKRKIIAFIGGLDLCAGRYDTPQHHIFKTLQTVHQ-DDYHNPNFTGPTT- 417
Query: 497 EDTMKDELDRRKYPRMPWHDVHCALWGPSCRDIARHFVQRWNYAKR 542
PR PWHD+HC + GP+ DI +F +RW A +
Sbjct: 418 -----------GCPREPWHDMHCRIDGPAAYDILTNFEERWLKASK 452
>GSVIVT01023350001 assembled CDS
Length = 842
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 114/253 (45%), Gaps = 53/253 (20%)
Query: 327 GSQAQWFIDGSAAFNA------IASSIEDAKSEIFICGWWLCPELYLRR----PFHAHAS 376
G + +DG F I ++ +A I+I GW + + L R P A
Sbjct: 209 GMLPEILLDGGKIFQQGQCWEEICHAMLEAHHLIYIIGWSIFHPVKLLREPTKPVPAGGE 268
Query: 377 SRLDALLEAKAKQGVQIYILLYKEVA----LALKINSVYSK-----RKLLSIHENVRVLR 427
L LL+ K+++GV++ +L++ + L K V RK H V +
Sbjct: 269 LSLGELLKYKSEEGVRVLMLIWDDKTSHDRLLFKTEGVMQTHDEETRKFFK-HSGVHCVL 327
Query: 428 YPDHFSSGV---------YLWSHHEKLVIVDHH--------ICFIGGLDLCFGRYDTREH 470
P + S+ + L++HH+K V++D FIGGLDLC GRYDT EH
Sbjct: 328 SPRYASNKLSIFKQQVVGTLFTHHQKCVLLDTQAPGNNRKITAFIGGLDLCDGRYDTPEH 387
Query: 471 RV-GDCPPLLWPGKDYYNPRESEPNSWEDTMKDELDRRKYPRMPWHDVHCALWGPSCRDI 529
R+ D + D++NP + P+ R + PR PWHD+HC + GP+ DI
Sbjct: 388 RLFSDLDTVF--SNDFHNP--TFPS-----------RARGPRQPWHDLHCKVEGPAAYDI 432
Query: 530 ARHFVQRWNYAKR 542
+F QRW A +
Sbjct: 433 MTNFEQRWRKAAK 445
>GSVIVT01027587001 assembled CDS
Length = 940
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 113/248 (45%), Gaps = 60/248 (24%)
Query: 343 IASSIEDAKSEIFICGWWLCPELYLRRPFHAHASSRLDALLEAKAKQGVQIYILLYKEVA 402
I +I A+ I+I GW + ++ L R + A L LL++K+++GV++ +LL+ +
Sbjct: 341 IFDAICQAQRLIYITGWSVWDKVRLVRDASSAAEYTLGELLKSKSQEGVRVLLLLWDDPT 400
Query: 403 ----LALKINSVYS----KRKLLSIHENVRVLRYPDHFSSGVYLW----------SHHEK 444
L K + + + + H +V+VL P F+ + W +HH+K
Sbjct: 401 SRNILGYKTDGIMQTHDEETRRFFKHSSVQVLLCP-RFAGKRHSWIKQREVETIYTHHQK 459
Query: 445 LVIVDHH--------ICFIGGLDLCFGRYDTREHRVGDCPPLLWPGKDYYNPRESEPNSW 496
VI+D I F+GGLDLC GRYDT H PL S
Sbjct: 460 TVILDADAGCNRRKIIAFVGGLDLCDGRYDTPHH------PLF--------------RSL 499
Query: 497 EDTMKDELDRRKY-------PRMPWHDVHCALWGPSCRDIARHFVQRWNYA------KRN 543
E KD+ + PR PWHD+HC + GP+ D+ +F +RW A K+
Sbjct: 500 EKEHKDDYHNPTFTGNVAGCPREPWHDMHCKIDGPAAYDVLTNFQERWLKAAKPHGIKKL 559
Query: 544 KAPYEEAI 551
K Y++A+
Sbjct: 560 KMSYDDAL 567
>GSVIVT01008734001 assembled CDS
Length = 823
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 110/258 (42%), Gaps = 72/258 (27%)
Query: 343 IASSIEDAKSEIFICGWWLCPELYL----RRPFHAHASSRLDALLEAKAKQGVQIYILLY 398
I SI +A ++I GW + ++ L RP + + L LL+ K+++GV++ +L++
Sbjct: 184 ICHSILEAHHLVYIVGWSVYHKVKLVREPTRPLPSGGNLNLGELLKYKSQEGVRVLLLVW 243
Query: 399 ---------------------KEVALALKINSVY--------SKRKLLSIHENV------ 423
+E K +SV SKRK E V
Sbjct: 244 DDKTSHSRFLVNTVGVMQTHDEETRKFFKHSSVLCVLSPRYASKRKFKIAKERVGPDGAF 303
Query: 424 -----------RVLRYPDHFSSGVYLWSHHEKLVIVDHH--------ICFIGGLDLCFGR 464
L P + S L++HH+K VIVD F+GGLDLC GR
Sbjct: 304 IFYQVGWQRWTSHLGIPTYISVVGTLFTHHQKCVIVDTQASGNNRKITAFLGGLDLCDGR 363
Query: 465 YDTREHRVGDCPPLLWPGKDYYNPRESEPNSWEDTMKDELDRRKYPRMPWHDVHCALWGP 524
YDT EHR+ ++ DY+NP S + K PR PWHD+HC + GP
Sbjct: 364 YDTPEHRLCHDLDTVFQN-DYHNPTFSAVS-------------KGPRQPWHDLHCKIEGP 409
Query: 525 SCRDIARHFVQRWNYAKR 542
+ D+ +F QRW A +
Sbjct: 410 AAYDVLTNFEQRWRKATK 427
>GSVIVT01016876001 assembled CDS
Length = 950
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 111/249 (44%), Gaps = 43/249 (17%)
Query: 312 HRFGSFAPPRGLTEDGSQAQWFIDGSAAFNAIASSIEDAKSEIFICGWWLCPELYLRR-- 369
H +F PP L + + W + +I+DAK I+I GW P++ L R
Sbjct: 368 HHCSTFQPPYSLCK-APRKLW--------EDVYKAIDDAKYLIYIAGWSFNPKMVLVRDP 418
Query: 370 ----PFHAHASSRLDALLEAKAKQGVQIYILLYK-EVALALKIN----SVYSKRKLLSI- 419
P+ H +L LL+ KA++GV + I+++ E +L L N S + +
Sbjct: 419 QTDIPY-GHGV-KLGELLKRKAEEGVAVRIMVWDDETSLPLIKNEGVMSTHDEEAFAYFK 476
Query: 420 HENVRVLRYPDHFSSGVYLWSHHEKLVIVDHH----------ICFIGGLDLCFGRYDTRE 469
H V P L++HH+K + VD + F+GGLDLC GRYDT E
Sbjct: 477 HTKVVCKLCPRLHFKFPTLFAHHQKTITVDSRSSISPSHREIMSFVGGLDLCNGRYDTEE 536
Query: 470 HRVGDCPPLLWPGKDYYNPRESEPNSWEDTMKDELDRRKYPRMPWHDVHCALWGPSCRDI 529
H + +D+Y + ++ ++ PR PWHD H + G + RD+
Sbjct: 537 HSLFRTLNTESHSQDFY----------QTSLIGACLQKGGPREPWHDAHACITGEAARDV 586
Query: 530 ARHFVQRWN 538
+F QRW+
Sbjct: 587 LTNFEQRWS 595
>GSVIVT01005195001 assembled CDS
Length = 1607
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 45/230 (19%)
Query: 343 IASSIEDAKSEIFICGWWLCPELYL----RRPFHAHASSRLDALLEAKAKQGVQIYILLY 398
I +I +A ++I GW + ++ L RP L LL+ K+++GV++ +L++
Sbjct: 908 ICHAIVEAHHMVYIVGWSIYHKVKLIREPTRPLPRGGDLTLGDLLKYKSEEGVRVLMLVW 967
Query: 399 KEVALALK--INSV-------YSKRKLLSIHENVRVLRYPDHFSSGV---------YLWS 440
+ K IN+ RK H +V + P + SS + +++
Sbjct: 968 DDRTSHDKFFINTKGVMETHDEETRKFFK-HSSVICVLSPRYASSKLSFIKQQVVGTIFT 1026
Query: 441 HHEKLVIVDHH--------ICFIGGLDLCFGRYDTREHRVGDCPPLLWPGKDYYNPRESE 492
HH+K V+VD F+GG+DLC GRYDT EHR+ ++ +D++NP
Sbjct: 1027 HHQKCVLVDSQAHGNNRKITAFLGGIDLCDGRYDTPEHRLFKDLDTVF-NEDFHNPTFPA 1085
Query: 493 PNSWEDTMKDELDRRKYPRMPWHDVHCALWGPSCRDIARHFVQRWNYAKR 542
+ K PR PWHD+HC + GP+ D+ +F QRW A +
Sbjct: 1086 GS-------------KAPRQPWHDLHCKIEGPAAYDVLINFEQRWKKATK 1122
>GSVIVT01035853001 assembled CDS
Length = 752
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 114/257 (44%), Gaps = 57/257 (22%)
Query: 343 IASSIEDAKSEIFICGWWLCPELYLRR----PFHAHASSRLDALLEAKAKQGVQIYILLY 398
I +I A+ I+I GW + ++ L R P A L LL+ KA QGV++ +L++
Sbjct: 155 IFYAIYRAQHLIYITGWSVYTKITLVRDSMEPKPAQIMMTLGELLKLKADQGVRVLMLIW 214
Query: 399 --KEVALALKINSVYSKRKLLSIHEN----------VRVL---RYPDHFSSGV------Y 437
+ ALK K L+ H+ VR + RY D S V
Sbjct: 215 DDRTSVEALK------KDGLMETHDQETADYFRDTKVRCVLCPRYSDRGRSTVQGFETST 268
Query: 438 LWSHHEKLVIVDHH-----------ICFIGGLDLCFGRYDTREHRVGDCPPLLWPGKDYY 486
+++HH+K V+VD + F+GG+DLC GRYDT+EH PL +
Sbjct: 269 MFTHHQKTVVVDSEMADIGYEKRRIVSFVGGIDLCGGRYDTQEH------PLFRTLGTIH 322
Query: 487 NPRESEPNSWEDTMKDELDRRKYPRMPWHDVHCALWGPSCRDIARHFVQRWNYAKRNKAP 546
+ +PN ++ + PR PWHD+HC L G D+ +F QRW R +
Sbjct: 323 HDDFHQPNFPGASIT-----KGGPREPWHDIHCRLEGAVAWDVLYNFEQRW----RKQVG 373
Query: 547 YEEAIPLLMPQQHMVIP 563
+ PL +Q V P
Sbjct: 374 EDGLFPLSKLEQITVRP 390
>GSVIVT01015542001 assembled CDS
Length = 703
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 50/226 (22%)
Query: 343 IASSIEDAKSEIFICGWWLCPELYLRRPFHAHASSRLDALLEAKAKQGVQIYILLYKEVA 402
I +I +AK ++I GW L + L + L LL+ KA +GV + +LL+++
Sbjct: 190 IFHAISNAKHLVYITGWSLYTKTTL---LFRKKTLTLGELLKKKASEGVTVLMLLWEDRT 246
Query: 403 LALKINSVYSKRKLLSIHEN-------------VRVLRYPDHFSSGVY------LWSHHE 443
+ K L++ H V R PD+ S V +++HH+
Sbjct: 247 SV----KLLKKDGLMATHGEDTGKYFHGTGVHCVLCPRNPDNGLSIVQDIEISAMFTHHQ 302
Query: 444 KLVIVDHH-----------ICFIGGLDLCFGRYDTREHRVGDCPPLLWPGKDYYNPRESE 492
K+V+VD + FIGG DLC GRYDT H + + + + R++
Sbjct: 303 KIVVVDSEMPNGGSEHRRIVSFIGGFDLCDGRYDTPTHSIFRTLDTV----HHNDFRQAN 358
Query: 493 -PNSWEDTMKDELDRRKYPRMPWHDVHCALWGPSCRDIARHFVQRW 537
PN+ + PR PWHD+HC L G D+ +F QRW
Sbjct: 359 FPNA--------SISKGGPREPWHDIHCRLEGAIAWDVLFNFEQRW 396