Jatropha Genome Database
- JcCA0011552.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0011552.10 - phase: 0 /pseudo/partial
(222 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01015062001 assembled CDS 318 1e-87
GSVIVT01016734001 assembled CDS 249 5e-67
GSVIVT01036719001 assembled CDS 85 3e-17
GSVIVT01003951001 assembled CDS 77 7e-15
GSVIVT01000336001 assembled CDS 74 6e-14
GSVIVT01032500001 assembled CDS 72 2e-13
GSVIVT01036721001 assembled CDS 72 2e-13
GSVIVT01036720001 assembled CDS 72 3e-13
GSVIVT01020224001 assembled CDS 69 2e-12
GSVIVT01007784001 assembled CDS 68 3e-12
GSVIVT01000338001 assembled CDS 62 2e-10
GSVIVT01007829001 assembled CDS 59 1e-09
GSVIVT01032588001 assembled CDS 59 2e-09
GSVIVT01023590001 assembled CDS 54 7e-08
GSVIVT01035891001 assembled CDS 53 9e-08
>GSVIVT01015062001 assembled CDS
Length = 508
Score = 318 bits (814), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 167/187 (89%)
Query: 1 MGFARKEYEFLSEIGLSSHNLGCYVNGTWKAHGPVVTTLNPANNQVIAEVVEGSLEDYEE 60
M F RKEY+FL+EIG+ N GCY+NG WKA GP+V+++NP+NNQ IA V E S+EDYEE
Sbjct: 1 MSFERKEYQFLAEIGVGPANPGCYINGEWKARGPLVSSVNPSNNQRIAVVTEASIEDYEE 60
Query: 61 GMQACSEAAKTWMQVPAPKRGEIVRQIGDALRVKLQQLGCLVSLEMGKILPEGIGEVQEI 120
G+ ACSEAAKTWM++PAPKRGEIVRQIG+ALR KL LG LVSLEMGKIL EGIGEVQEI
Sbjct: 61 GLMACSEAAKTWMKIPAPKRGEIVRQIGEALRAKLGSLGRLVSLEMGKILAEGIGEVQEI 120
Query: 121 IDMCDFAVGLSRQLNGSIIPSERPNHVMLETWNPLGIVGVITAFNFPCAVLGWNACIALV 180
+DMCD+AVGLSRQ+NGSIIPSERP+H+M E WNP+GIVGVITAFNFPCAVLGWNAC+ALV
Sbjct: 121 VDMCDYAVGLSRQINGSIIPSERPDHMMCEVWNPMGIVGVITAFNFPCAVLGWNACLALV 180
Query: 181 CGNCVVW 187
CGNCVVW
Sbjct: 181 CGNCVVW 187
>GSVIVT01016734001 assembled CDS
Length = 485
Score = 249 bits (637), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/187 (67%), Positives = 144/187 (77%), Gaps = 2/187 (1%)
Query: 3 FARKEYEFLSEIGLSSHNLGCYVNGTWKAHGP-VVTTLNPANNQVIAEVVEGSLEDYEEG 61
FAR EY FLSEI LS + G YVNG WK +VT++NP +N+ IA V EGS+EDYEEG
Sbjct: 9 FARSEYMFLSEIDLSVVHPGYYVNGKWKGRSSSMVTSVNPVDNETIAAVTEGSIEDYEEG 68
Query: 62 MQACSEAAKTWMQVPAPKRGEIVRQIGDALRVKLQQLGCLVSLEMGKILPEGIGEVQEII 121
+QACS+AAK WM+ P KR EIVRQIGDALR KLQ G LVSLE+GKIL GIGEVQE+I
Sbjct: 69 IQACSKAAKLWMKTPVSKRCEIVRQIGDALRAKLQLFGRLVSLEVGKILVAGIGEVQEVI 128
Query: 122 DMCDFAVGLSRQLN-GSIIPSERPNHVMLETWNPLGIVGVITAFNFPCAVLGWNACIALV 180
DMCD+A GLS +LN + I ER NHV L+ NP G+VGVIT FNFPCAVLG NAC+ALV
Sbjct: 129 DMCDYAAGLSEKLNLNASIRHERQNHVTLQLRNPFGVVGVITPFNFPCAVLGRNACMALV 188
Query: 181 CGNCVVW 187
GNCVVW
Sbjct: 189 TGNCVVW 195
>GSVIVT01036719001 assembled CDS
Length = 525
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 23 CYVNGTWKA--HGPVVTTLNPANNQVIAEVVEGSLEDYEEGMQACSEAAKTWMQVPAPKR 80
C + G W G + NPA V+ V ++ + + EA +W ++ A +R
Sbjct: 52 CLIGGKWTEAYDGKTIPVHNPATGDVLVNVPCMGGQETNDAISVAYEAFLSWSKLTAAER 111
Query: 81 GEIVRQIGDALRVKLQQLGCLVSLEMGKILPEGIGEVQEIIDMCDFAVGLSRQLNGSIIP 140
+ +R+ D L ++LG +++LE GK L E IGEV +F+ ++++ G IIP
Sbjct: 112 SKRLRKWYDLLIANKEELGQIITLEQGKPLKEAIGEVNYGAAFIEFSAEEAKRIYGDIIP 171
Query: 141 SERPNHVMLETWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVV 186
S + +L P+G+VG IT +NFP A++ AL CG VV
Sbjct: 172 SPLADRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVV 217
>GSVIVT01003951001 assembled CDS
Length = 1306
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%)
Query: 35 VVTTLNPANNQVIAEVVEGSLEDYEEGMQACSEAAKTWMQVPAPKRGEIVRQIGDALRVK 94
++ +NPA +V++EV + E+++ + A +A +W P R I+ ++ + +R
Sbjct: 92 IIDVINPATQEVVSEVPLTTYEEFKAAVSAAKQAYPSWRNTPVTTRQRIMFKLQELIRRD 151
Query: 95 LQQLGCLVSLEMGKILPEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHVMLETWNP 154
+ +L +++E GK L G+V +++ + A G++ G +P+ P
Sbjct: 152 IDKLAMNITIEQGKTLKGAQGDVLRGLEVVEHACGMATLQMGEFVPNASNGIDTYCLREP 211
Query: 155 LGIVGVITAFNFPCAVLGWNACIALVCGNCVV 186
LG+ I FNFP + W IA+ CGN +
Sbjct: 212 LGVCAGICPFNFPAMISLWMFPIAVTCGNTFI 243
>GSVIVT01000336001 assembled CDS
Length = 539
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 36 VTTLNPANNQVIAEVVEGSLEDYEEGMQACSEAAKTWMQVPAPKRGEIVRQIGDALRVKL 95
+ +NPA QV++++ S E+++ + A +A W P R I+ ++ +R +
Sbjct: 60 IDVINPATQQVVSQIPLTSNEEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQQLIRRDI 119
Query: 96 QQLGCLVSLEMGKILPEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHVMLETWNPL 155
+L ++ E GK L + G+V +++ + A G++ G +P+ PL
Sbjct: 120 DKLAMNITTEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGEFVPNVSSGIDTYSIREPL 179
Query: 156 GIVGVITAFNFPCAVLGWNACIALVCGNCVV 186
G+ I FNFP + W IA+ CGN V
Sbjct: 180 GVCAGICPFNFPAMIPLWMFPIAVTCGNTFV 210
>GSVIVT01032500001 assembled CDS
Length = 535
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 25 VNGTW--KAHGPVVTTLNPANNQVIAEVVEGSLEDYEEGMQACSEAAKTWMQVPAPK--- 79
+NG + A G TL+P VIA V EG ED +A S A K + + P PK
Sbjct: 59 INGRFVDAASGKTFPTLDPRTGDVIAHVAEGEAEDIN---RAVSAARKAFDEGPWPKMTP 115
Query: 80 --RGEIVRQIGDALRVKLQQLGCLVSLEMGKILPEGIG-EVQEIIDMCDFAVGLSRQLNG 136
R I+ + D L ++ L S + GK + E+ +I + + G + +++G
Sbjct: 116 YERSCILFRFADLLEKHCSEIAALESWDNGKPYEQAANVEIPMVIRVFRYYAGWADKIHG 175
Query: 137 SIIPSERPNHVMLETWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVV 186
+P++ +HV P+G+ G I +NFP + GW AL CGN +V
Sbjct: 176 LTVPADGLHHVQT-LHEPIGVAGQIIPWNFPLLLYGWKVGPALACGNTIV 224
>GSVIVT01036721001 assembled CDS
Length = 559
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 25 VNGTW--KAHGPVVTTLNPANNQVIAEVVEGSLEDYEEGMQACSEAAKTWMQVPAPKRGE 82
+ G W G NPA +V+A V ++ + + + A +W ++ +R +
Sbjct: 90 IGGKWMDAYDGKTFEVYNPATGEVLANVACMGKKEANDAIASAHAAFTSWSKLTTAERSK 149
Query: 83 IVRQIGDALRVKLQQLGCLVSLEMGKILPEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSE 142
++R+ D L +LG L++LE GK + EG EV +F + + G IIP
Sbjct: 150 LMRKWYDLLIAHQTELGQLITLEQGKPVAEGYNEVLIGASCLEFFLEEVKHCYGDIIPQT 209
Query: 143 RPNHVMLETWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVV 186
+ + M P+G+VG IT +N P A+ A+ CG VV
Sbjct: 210 QADRRMFVLKQPVGVVGAITPWNLPLAMALRKVSPAMACGCTVV 253
>GSVIVT01036720001 assembled CDS
Length = 493
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 2/164 (1%)
Query: 25 VNGTWKA--HGPVVTTLNPANNQVIAEVVEGSLEDYEEGMQACSEAAKTWMQVPAPKRGE 82
+ G W G + NPA +VIA+V + + + + E +W +V A +R +
Sbjct: 22 IGGKWTEAYDGKTIQVHNPATGEVIADVPCMGQPETNDAISSAYEMFNSWSKVTAIERSQ 81
Query: 83 IVRQIGDALRVKLQQLGCLVSLEMGKILPEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSE 142
+ + D L ++LG L++LE GK L E I EV +F ++ + IIPS
Sbjct: 82 CLWKWHDLLIAHKEELGQLITLEQGKPLNEAIIEVIIAAGYLEFFAEEAKHVYSDIIPST 141
Query: 143 RPNHVMLETWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVV 186
+ + P+G+VG IT +NFP A+L AL CG VV
Sbjct: 142 VADCQLFVIKQPVGVVGAITPWNFPLAMLTSKVGPALACGCTVV 185
>GSVIVT01020224001 assembled CDS
Length = 538
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 25 VNGTW--KAHGPVVTTLNPANNQVIAEVVEGSLEDYEEGMQACSEAAK--TWMQVPAPKR 80
+NG + A G TL+P VIA V EG ED + A +A W ++ +R
Sbjct: 62 INGQFVDAATGKTFETLDPRTGNVIASVAEGDAEDVNRAVSAARKAFDEGPWPRMSPYER 121
Query: 81 GEIVRQIGDALRVKLQQLGCLVSLEMGKILPEGI-GEVQEIIDMCDFAVGLSRQLNGSII 139
+I+ + D L ++ L + + GK + EV +I + + G + +++G +
Sbjct: 122 SKILLRFADLLEKHNDEIAALETWDNGKPFEQAAKAEVPLVIRLMRYYAGWADKIHGLTV 181
Query: 140 PSERPNHVMLETWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVV 186
P++ + V P+G+ G I +NFP + W AL CGN +V
Sbjct: 182 PADGLHQVQT-LHEPIGVAGQIIPWNFPLLMYAWKIGPALACGNTIV 227
>GSVIVT01007784001 assembled CDS
Length = 538
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 25 VNGTW--KAHGPVVTTLNPANNQVIAEVVEGSLEDYEEGMQACSEAAK--TWMQVPAPKR 80
+NG + A G T +P +VIA V EG ED + A +A W ++ +R
Sbjct: 62 INGQFVDAASGKTFPTFDPRTGEVIANVAEGDAEDINRAVSAARKAFDEGPWPRMSPYER 121
Query: 81 GEIVRQIGDALRVKLQQLGCLVSLEMGKILPEGI-GEVQEIIDMCDFAVGLSRQLNGSII 139
I+ + D +L L + GK + E+ + + + G + +++G +
Sbjct: 122 SRILLRFADLAEKHNDELAALETWNNGKPYEQAAKAELPLFVRLFRYYAGWADKIHGLTV 181
Query: 140 PSERPNHVMLETWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVV 186
++ P+HV + P+G+ G I +NFP + W AL CGN +V
Sbjct: 182 QADGPHHVQI-LHEPIGVAGQIIPWNFPLMMFAWKVGPALACGNTIV 227
>GSVIVT01000338001 assembled CDS
Length = 592
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%)
Query: 36 VTTLNPANNQVIAEVVEGSLEDYEEGMQACSEAAKTWMQVPAPKRGEIVRQIGDALRVKL 95
+ NPA +V+++V + E++ + A A +W P R I+ + + +R +
Sbjct: 234 IDVTNPATQKVVSQVPLTTNEEFRAAIFAAKRAFPSWRDTPVTTRQRIMFKFQELIRRDI 293
Query: 96 QQLGCLVSLEMGKILPEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHVMLETWNPL 155
++ ++ E GK L + +V +++ + A G++ G + + PL
Sbjct: 294 DKIAMNITTEHGKTLKDAYTDVHRGLEVVEHACGMATLQMGEFVSNVSNGIDTYSIREPL 353
Query: 156 GIVGVITAFNFPCAVLGWNACIALVCGNCVV 186
G+ I F+FP + W IA+ CGN +
Sbjct: 354 GVCAGICPFDFPAMIPLWMFPIAVTCGNTFI 384
>GSVIVT01007829001 assembled CDS
Length = 503
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 22/175 (12%)
Query: 24 YVNGTW-----KAHGPVVTTLNPANNQVIAEVVEGSLEDYEEGMQACSEA-----AKTWM 73
+++G W K PV+ NPA Q I + + ED E + A A W
Sbjct: 11 FIDGKWVEPITKRRIPVI---NPATEQTIGLIPAATGEDVELAVDAARRAFARNKGADWA 67
Query: 74 QVPAPKRGEIVRQIGDALRVKLQQLGCLVSLEMGKILPEGIGEVQEIIDMCDFAVGLSRQ 133
+ P R + +R I + + +L L +L+ GK L E ++ ++ ++ +
Sbjct: 68 KAPGAVRAKYLRAIAAKITERKTELAKLEALDCGKPLDEAAWDIDDVASCFEYFADHAEA 127
Query: 134 LNGSIIPSERPNHVMLETWN------PLGIVGVITAFNFPCAVLGWNACIALVCG 182
L+ + P + +ET+ P+G+VG+IT +N+P + W AL G
Sbjct: 128 LDAQ---QKAPLSLPMETFKCHILKEPVGVVGLITPWNYPLLMATWKVAPALAAG 179
>GSVIVT01032588001 assembled CDS
Length = 499
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 24 YVNGTWKAH--GPVVTTLNPANNQVIAEVVEGSLEDYEEGMQACSEA---AKTWMQVPAP 78
+++G W+ + +NPA ++I ++ + ED + ++A A +W
Sbjct: 12 FIDGEWREPLLKKRIPIINPATQEIIGDIPAATAEDVDIAVEAARRAFSKPDSWASTSGS 71
Query: 79 KRGEIVRQIGDALRVKLQQLGCLVSLEMGKILPEGIGEVQEIIDMCDFAVGLSRQLNGS- 137
R + +R I D + + +L L ++ GK + E I ++ + + L+ L+
Sbjct: 72 FRAKFLRAIADKILERKIELAKLEVVDCGKPIDEAISDMVSVAGCFKYYAELAEALDAKQ 131
Query: 138 ----IIPSER-PNHVMLETWNPLGIVGVITAFNFPCAVLGWNACIALVCG 182
IP E HV+ E P+G+V +IT +N+P + W AL G
Sbjct: 132 RIPISIPMESFKTHVLKE---PIGVVALITPWNYPLLMAAWKVAPALAAG 178
>GSVIVT01023590001 assembled CDS
Length = 496
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 11/173 (6%)
Query: 24 YVNGTWKA--HGPVVTTLNPANNQVIAEVVEGSLEDYEEGMQACSEAAKTWMQVPAPKRG 81
Y G W+ G V +NP + V S E+ + M+ A K W + P KR
Sbjct: 19 YSEGEWRKAVSGKSVAIINPTTRKTQYRVQACSQEEVNKAMEIAKSAQKIWAKTPLWKRA 78
Query: 82 EIVRQIGDALRVKLQQLG-CLVSLEMGKILPEGIGEVQEIIDMCDFA-------VGLSRQ 133
E++ + L+ + CLV E+ K + + EV D+ + +G +
Sbjct: 79 ELLHKAAAILKEHKAPIAECLVK-EIAKPAKDAVTEVVRSGDLVSYTAEEGVRILGEGKF 137
Query: 134 LNGSIIPSERPNHVMLETWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVV 186
L P + L + PLG++ I FN+P + AL+ GN +V
Sbjct: 138 LVSDSFPGNERSKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIV 190
>GSVIVT01035891001 assembled CDS
Length = 496
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 11/173 (6%)
Query: 24 YVNGTWK--AHGPVVTTLNPANNQVIAEVVEGSLEDYEEGMQACSEAAKTWMQVPAPKRG 81
Y +G WK + G V +NP +V + E+ + M+ A K W + P KR
Sbjct: 19 YTDGAWKTSSSGKSVPIINPTTRSTQYKVQACTQEEVNKVMETAKNAQKLWAKTPLWKRA 78
Query: 82 EIVRQIGDALRVKLQQLG-CLVSLEMGKILPEGIGEVQEIIDMCDFA-------VGLSRQ 133
E++ + L+ + + CLV E+ K + + EV D+ + +G +
Sbjct: 79 ELLHKAAAILKEQKAPIAECLVK-EIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKF 137
Query: 134 LNGSIIPSERPNHVMLETWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVV 186
L P + L + PLG++ I FN+P + AL+ GN +V
Sbjct: 138 LVSDSFPGNERSKYCLTSKIPLGVILAIPPFNYPVNLAVSKIGPALIAGNSLV 190