Jatropha Genome Database

JcCA0009731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0009731.10 + phase: 0 /partial
         (396 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01017814001 assembled CDS                                       559   e-160
GSVIVT01011001001 assembled CDS                                       536   e-153
GSVIVT01021972001 assembled CDS                                       535   e-152
GSVIVT01000002001 assembled CDS                                       453   e-128
GSVIVT01037753001 assembled CDS                                       387   e-108
GSVIVT01019361001 assembled CDS                                        94   1e-19

>GSVIVT01017814001 assembled CDS
          Length = 541

 Score =  559 bits (1441), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 282/393 (71%), Positives = 319/393 (81%), Gaps = 9/393 (2%)

Query: 6   SLGAIFSATDSVCTLQVLDQEETPLLYSLVFGEGVVNDATVVVLFNAIQRFDLSHITSSI 65
           +LGAIFSATDSVCTLQVL+Q+ETPLLYSLVFGEGVVNDAT VVLFNAIQ FDLSHI SSI
Sbjct: 151 ALGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLSHIDSSI 210

Query: 66  AVQLFGNFLYLFVTSTFLGVAVGLGSAYIIKKLYFGRHSTDREVALMILMAYLSYIMAEL 125
           A+Q  GNFLYLF+TST LGV  GL SAYIIKKLYFGRHSTDREVA+MILMAYLSY++AEL
Sbjct: 211 ALQFIGNFLYLFITSTMLGVFAGLLSAYIIKKLYFGRHSTDREVAIMILMAYLSYMLAEL 270

Query: 126 FNLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHSFATLSFIAEIYIFLYVGMDALDMEK 185
           F LSAILTVFFCGIVMSHYTWHNVTESSRVTTKH+FATLSF+AEI+IFLYVGMDALD+EK
Sbjct: 271 FYLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEK 330

Query: 186 WKIVSKSPGTXXXXXXXXXXXXXXXRAAFIFPLSFISNLTRKSQGDKIGLKQQVVIWWAG 245
           W+ VS SPG                RAAF+FPLSF+SNLT+KS  +KI +KQQV IWWAG
Sbjct: 331 WRFVSDSPGKSIGVSSILLGLVLVGRAAFVFPLSFLSNLTKKSSSEKIHIKQQVTIWWAG 390

Query: 246 LMRGAVSMALAYNQFTQSGHTQLPGNAIMITSTITVVLFSTVVFGXXXXXXXXXXXXXXH 305
           LMRGAVSMALAYNQFT++GHTQL GNAIMITSTI+VVLFSTVVFG               
Sbjct: 391 LMRGAVSMALAYNQFTRAGHTQLRGNAIMITSTISVVLFSTVVFGLMTKPLVRLLLPSPK 450

Query: 306 TSHALLAYLDS--KSLDLPLIANGKDLESEMSGDGNPSGDIIHRPASLRMLL-TPTYTVH 362
              ++++   S  K L +PLI NG++ E++ +    P      RP SLRMLL TP++TVH
Sbjct: 451 PFTSMISSEPSSPKYLVVPLIGNGEETETDQASQNVP------RPTSLRMLLSTPSHTVH 504

Query: 363 YYWRKFDDSFMRPVFGGRGFTPYVPGSPTEGSL 395
           +YWRKFDDSFMRPVFGGRGFTP++PGSPTE +L
Sbjct: 505 HYWRKFDDSFMRPVFGGRGFTPFIPGSPTEPNL 537


>GSVIVT01011001001 assembled CDS
          Length = 538

 Score =  536 bits (1380), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 272/390 (69%), Positives = 306/390 (78%), Gaps = 9/390 (2%)

Query: 6   SLGAIFSATDSVCTLQVLDQEETPLLYSLVFGEGVVNDATVVVLFNAIQRFDLSHITSSI 65
           ++GAIFSATDSVCTLQVL+Q+ETPLLYSLVFGEGVVNDAT VVLFNAIQRFDLSHITS I
Sbjct: 148 AIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQRFDLSHITSGI 207

Query: 66  AVQLFGNFLYLFVTSTFLGVAVGLGSAYIIKKLYFGRHSTDREVALMILMAYLSYIMAEL 125
           A Q  GNFL LF  ST LGV +GL SAYI+KKLYFGRHSTDREVALMI+MAYLSYIMAEL
Sbjct: 208 AFQFVGNFLSLFFASTLLGVFIGLLSAYIMKKLYFGRHSTDREVALMIVMAYLSYIMAEL 267

Query: 126 FNLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHSFATLSFIAEIYIFLYVGMDALDMEK 185
           F LS ILTVFFCGIVMSHYTWHNVTESSRVTTKH+FATLSF++EI+IFLYVG+DALD+EK
Sbjct: 268 FYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHTFATLSFVSEIFIFLYVGIDALDIEK 327

Query: 186 WKIVSKSPGTXXXXXXXXXXXXXXXRAAFIFPLSFISNLTRKSQGDKIGLKQQVVIWWAG 245
           W++VS SPGT               RAAF+FPLSF+SNLT+KS+ DKIG KQQ+ IWWAG
Sbjct: 328 WRVVSNSPGTSIGVSSILLGLVLIGRAAFVFPLSFLSNLTKKSESDKIGFKQQITIWWAG 387

Query: 246 LMRGAVSMALAYNQFTQSGHTQLPGNAIMITSTITVVLFSTVVFGXXXXXXXXXXX--XX 303
           LMRGAVS+ALAYNQFT SGHTQL GNAIMITSTIT+VLFST+VFG               
Sbjct: 388 LMRGAVSVALAYNQFTMSGHTQLRGNAIMITSTITIVLFSTLVFGLMTKPLISFLLPPPK 447

Query: 304 XHTSHALLAYLDSKSLDLPLIANGKDLESEMSGDGNPSGDIIHRPASLRML-LTPTYTVH 362
             +S         KS  +PL+ANG+D + E      P       P +LRML  TPT+TVH
Sbjct: 448 YFSSMMSSEPSSPKSFSMPLLANGQDPDIEGDSHNTPP------PTNLRMLWTTPTHTVH 501

Query: 363 YYWRKFDDSFMRPVFGGRGFTPYVPGSPTE 392
           +YWRKFD+++MRPVFGGRGF PYV  S TE
Sbjct: 502 HYWRKFDNAYMRPVFGGRGFVPYVATSLTE 531


>GSVIVT01021972001 assembled CDS
          Length = 540

 Score =  535 bits (1377), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 271/400 (67%), Positives = 313/400 (78%), Gaps = 13/400 (3%)

Query: 1   FDI--MTSLGAIFSATDSVCTLQVLDQEETPLLYSLVFGEGVVNDATVVVLFNAIQRFDL 58
           FDI    ++GAIFSATDSVCTLQVL+Q+ETPLLYSLVFGEGVVNDA  VVLFNAIQ FDL
Sbjct: 145 FDIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDAASVVLFNAIQSFDL 204

Query: 59  SHITSSIAVQLFGNFLYLFVTSTFLGVAVGLGSAYIIKKLYFGRHSTDREVALMILMAYL 118
           +H    IA+Q  GNF YLF TST LGV  GL SAYIIK LYFGRHSTDREVALM+LMAYL
Sbjct: 205 THTNLRIALQFIGNFFYLFFTSTMLGVVAGLLSAYIIKTLYFGRHSTDREVALMMLMAYL 264

Query: 119 SYIMAELFNLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHSFATLSFIAEIYIFLYVGM 178
           SYI+AELF LS ILTVFFCGIVMSHYTWHNVTESSRVTTKH+FATLSF+AEI+IFLYVGM
Sbjct: 265 SYILAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGM 324

Query: 179 DALDMEKWKIVSKSPGTXXXXXXXXXXXXXXXRAAFIFPLSFISNLTRKSQGDKIGLKQQ 238
           DALD+EKW+ VSK+PGT               RAAF+FPLSF+SNL +K+  +KI  +QQ
Sbjct: 325 DALDIEKWRFVSKTPGTSVAVSSILIGLVLVGRAAFVFPLSFLSNLAKKNPTEKITFRQQ 384

Query: 239 VVIWWAGLMRGAVSMALAYNQFTQSGHTQLPGNAIMITSTITVVLFSTVVFGXXXXXXXX 298
           V+IWWAGLMRGAVS+ALAYNQF +SGHTQL  NAIMITSTITVVLFSTVVFG        
Sbjct: 385 VIIWWAGLMRGAVSVALAYNQFARSGHTQLRSNAIMITSTITVVLFSTVVFGLMTQPLIR 444

Query: 299 XXXXXXHTSHALLAYLDS---KSLDLPLIANGKDLESEMSGDGNPSGDIIHRPASLRMLL 355
                   + +++ Y DS   KS  +PL+ + ++ +++M G G P      RP+SLRMLL
Sbjct: 445 FLLPHSKNTTSMV-YSDSSTPKSFAVPLLESAQNSDADMGGHGFP------RPSSLRMLL 497

Query: 356 -TPTYTVHYYWRKFDDSFMRPVFGGRGFTPYVPGSPTEGS 394
            TP+ +VH+YWRKFDD+ MRP+FGGRGF P+VPGSPTE S
Sbjct: 498 TTPSRSVHHYWRKFDDAIMRPMFGGRGFVPFVPGSPTERS 537


>GSVIVT01000002001 assembled CDS
          Length = 541

 Score =  453 bits (1165), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/391 (58%), Positives = 283/391 (72%), Gaps = 14/391 (3%)

Query: 6   SLGAIFSATDSVCTLQVLDQEETPLLYSLVFGEGVVNDATVVVLFNAIQRFDLSHITSSI 65
           ++GAI SATDSVCTLQVL+QEETP LYS+VFGEGVVNDAT +V++NA+Q  DLS+I +  
Sbjct: 153 AVGAILSATDSVCTLQVLNQEETPFLYSVVFGEGVVNDATSIVIYNAVQSLDLSNIDALT 212

Query: 66  AVQLFGNFLYLFVTSTFLGVAVGLGSAYIIKKLYFGRHSTDREVALMILMAYLSYIMAEL 125
           A++L G FLYLF TST LGV  GL SAYIIK LYFGRHSTDREVALM++MAYLSY++AEL
Sbjct: 213 ALKLLGTFLYLFFTSTILGVVAGLLSAYIIKTLYFGRHSTDREVALMMIMAYLSYMLAEL 272

Query: 126 FNLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHSFATLSFIAEIYIFLYVGMDALDMEK 185
            +LS ILTVFFCGIVMSHYTWHNVTESSR+TTKH+FAT+SFIAE +IFLYVGMDALD++K
Sbjct: 273 LSLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATISFIAETFIFLYVGMDALDIDK 332

Query: 186 WKIVSKSPGTXXXXXXXXXXXXXXXRAAFIFPLSFISNLTRKSQGDKIGLKQQVVIWWAG 245
           W+    S GT               RAAF+F LS I N  + ++  K+  +QQ +IWWAG
Sbjct: 333 WRSSKASAGTSVSVSSAFLALVLIGRAAFVFSLSNILNFFKSAESTKVEFRQQFIIWWAG 392

Query: 246 LMRGAVSMALAYNQFTQSGHTQLPGNAIMITSTITVVLFSTVVFGXXXXXXXXXXXXXXH 305
           LMRGAV++AL+Y++F+ S  T    +A+MITSTI VVLFSTVVFG               
Sbjct: 393 LMRGAVTIALSYSEFSDSETTSTQDSALMITSTIIVVLFSTVVFGSITKPLI-------- 444

Query: 306 TSHALLAYLDSKSLDLPLIANGKDLESEMSGDGNPSGDIIHRP----ASLRMLLT-PTYT 360
               LL +      D   IA+ +DL      +G+PS    ++P    ++LR+L+  PT T
Sbjct: 445 -GAVLLRHAKPTVSDATDIASLEDLRLLFLENGDPSDGGNNQPSPKASNLRLLMRYPTST 503

Query: 361 VHYYWRKFDDSFMRPVFGGRGFTPYVPGSPT 391
            HY+WRKFDD +MRP+FGGRGF PYVPGSPT
Sbjct: 504 AHYFWRKFDDKYMRPMFGGRGFVPYVPGSPT 534


>GSVIVT01037753001 assembled CDS
          Length = 524

 Score =  387 bits (995), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/387 (54%), Positives = 261/387 (67%), Gaps = 15/387 (3%)

Query: 6   SLGAIFSATDSVCTLQVLDQEETPLLYSLVFGEGVVNDATVVVLFNAIQRFDLSHITSSI 65
           ++G IFS+TD+VCTLQVL Q+ETPLLYSLVFGEGVVNDAT VVLFNA+Q+ D S +    
Sbjct: 145 AIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDKSKLNGWA 204

Query: 66  AVQLFGNFLYLFVTSTFLGVAVGLGSAYIIKKLYFGRHSTDREVALMILMAYLSYIMAEL 125
           A+++  + LYLF TST LGV  GL +AY +K LY GRHST RE+ALM+LMAYLSY +AEL
Sbjct: 205 ALRVLLDSLYLFSTSTALGVVAGLLTAYTLKTLYIGRHSTVREIALMVLMAYLSYTLAEL 264

Query: 126 FNLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHSFATLSFIAEIYIFLYVGMDALDMEK 185
           F+LS ILTVFFCGI+MSHY  HNVT+SSR+TT+H FAT+SFIAE +IFLYVG+DALD+EK
Sbjct: 265 FHLSGILTVFFCGILMSHYASHNVTQSSRITTRHIFATMSFIAETFIFLYVGIDALDIEK 324

Query: 186 WKIVSKSPGTXXXXXXXXXXXXXXXRAAFIFPLSFISNLT--RKSQGDKIGLKQQVVIWW 243
           WK+   S  T               RAAF+FPLS  SN    R  +   I  K QV+IWW
Sbjct: 325 WKLSKLSFRTSVGIYSTVVLLISLGRAAFVFPLSTFSNYVHRRADRLSSISFKHQVIIWW 384

Query: 244 AGLMRGAVSMALAYNQFTQSGHTQLPGNAIMITSTITVVLFSTVVFGXXXXXXXXXXXXX 303
           AGLMRGAVS+ALA+ QFT SG T  P NA M+T+TI VVLF+T+VFG             
Sbjct: 385 AGLMRGAVSIALAFKQFTYSGVTLDPANATMVTTTIIVVLFTTLVFG-FLTKPLISFLQP 443

Query: 304 XHTSHALLAYLDSKSLDLPLIANGKDLESEMSGDGNPSGDIIHRPASLRMLLT-PTYTVH 362
            HT+       ++ S   P           +S + +   +I+    SL ML+  P YT+H
Sbjct: 444 HHTN-------NNTSHGEPRSPKEDLSLPLLSLEESAETNILRAKESLSMLIERPVYTIH 496

Query: 363 YYWRKFDDSFMRPVFGGRGFTPYVPGS 389
            YWRKFDD++MRPVFGG    PY  G+
Sbjct: 497 NYWRKFDDTYMRPVFGG----PYESGN 519


>GSVIVT01019361001 assembled CDS
          Length = 316

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 16/185 (8%)

Query: 108 EVALMILMAYLSYIMAELFNLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHSFATLSFI 167
           E  L +L  Y SY++AE   LS I+++ F GIVM HYT+ N++E+S+      F  +S +
Sbjct: 47  ECCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYTFSNLSENSQRFVSAFFHLISSL 106

Query: 168 AEIYIFLYVGMD-ALDMEKWKIVSKSPGTXXXXXXXXXXXXXXXRAAFIFPLSFISNLTR 226
           AE ++F+Y+G D A++   W  V                     RAA +F  +++ NL R
Sbjct: 107 AETFVFIYMGFDIAMEQHSWSHVGFI--------FFSILFIIVARAANVFSCAYMVNLIR 158

Query: 227 KSQGDKIGLKQQVVIWWAGLMRGAVSMALAYNQFTQSGHTQLPGNAIMI-TSTITVVLFS 285
            +   +I LK Q  +W++GL RGA++ ALA     QS H    G+   I T+T  +V+ +
Sbjct: 159 PAH-RQIPLKHQKALWYSGL-RGAMAFALA----LQSVHDLPEGHGQTIFTATTAIVVLT 212

Query: 286 TVVFG 290
            ++ G
Sbjct: 213 VLLIG 217