Jatropha Genome Database
- JcCA0009632.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0009632.20 - phase: 0 /pseudo/partial
(245 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01031241001 assembled CDS 211 4e-55
GSVIVT01007715001 assembled CDS 152 2e-37
GSVIVT01009273001 assembled CDS 133 6e-32
GSVIVT01013790001 assembled CDS 132 2e-31
GSVIVT01030488001 assembled CDS 127 4e-30
GSVIVT01004811001 assembled CDS 127 4e-30
GSVIVT01019880001 assembled CDS 80 8e-16
GSVIVT01035921001 assembled CDS 76 1e-14
GSVIVT01012897001 assembled CDS 74 7e-14
GSVIVT01034073001 assembled CDS 61 6e-10
GSVIVT01009779001 assembled CDS 59 1e-09
GSVIVT01009781001 assembled CDS 59 3e-09
GSVIVT01024224001 assembled CDS 57 6e-09
GSVIVT01025220001 assembled CDS 56 2e-08
GSVIVT01019043001 assembled CDS 55 2e-08
GSVIVT01037575001 assembled CDS 55 4e-08
GSVIVT01009633001 assembled CDS 55 4e-08
GSVIVT01016458001 assembled CDS 55 4e-08
GSVIVT01011146001 assembled CDS 54 6e-08
GSVIVT01019399001 assembled CDS 53 1e-07
GSVIVT01035361001 assembled CDS 49 2e-06
>GSVIVT01031241001 assembled CDS
Length = 310
Score = 211 bits (536), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/148 (68%), Positives = 114/148 (77%), Gaps = 2/148 (1%)
Query: 93 FLADEAAGTSEEELSCGEIEASESQESSGGRPNDQDVKGMLMRKYSGYLSNXXXXXXXXX 152
+ +DEAAGTSEEELSCGE E SESQES G RP DQ++K MLMRKYSGYLS+
Sbjct: 159 YYSDEAAGTSEEELSCGEAEVSESQESLGARPGDQELKEMLMRKYSGYLSSLRKEFLKKR 218
Query: 153 XXXXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPS 212
T+LL+WWN HYRWPYPTEDEK+KLSE+TGLDQKQINNWFINQRKRHWKPS
Sbjct: 219 KKGKLPKDARTMLLEWWNTHYRWPYPTEDEKLKLSEVTGLDQKQINNWFINQRKRHWKPS 278
Query: 213 EDMRFALMEGVSVSSSMIGGPSYFDTGG 240
EDMRFAL++G VS +M GGP + DT G
Sbjct: 279 EDMRFALIDG--VSGNMGGGPVFLDTRG 304
>GSVIVT01007715001 assembled CDS
Length = 319
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 94/133 (70%), Gaps = 4/133 (3%)
Query: 91 KRFLADEAAGTSEEELSCGEIEASESQESSGGRPNDQDVKGMLMRKYSGYLSNXXXXXXX 150
+ +++DEAAG+SEE+LS GE+E E +++ +Q++K L+RKYSGY+S
Sbjct: 183 RSYVSDEAAGSSEEDLSGGEVEVQECLQTT----ENQELKDKLLRKYSGYISTLKHEFSK 238
Query: 151 XXXXXXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWK 210
LLDWWN HY+WPYPTE++K+ L+E TGLDQKQINNWFINQRKRHWK
Sbjct: 239 TKKKGKLPKEARQALLDWWNIHYKWPYPTEEDKIALAESTGLDQKQINNWFINQRKRHWK 298
Query: 211 PSEDMRFALMEGV 223
PSE+M+FA+M+ +
Sbjct: 299 PSENMQFAVMDSI 311
>GSVIVT01009273001 assembled CDS
Length = 341
Score = 133 bits (335), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 97 EAAGTSEEEL--SCGEIEASESQESSGGRPNDQDVKGMLMRKYSGYLSNXXXXXXXXXXX 154
E G+SEE+ S GE E E R D+++K L+RKYSGYLS+
Sbjct: 194 EGVGSSEEDQDNSGGETELPEI----DPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKK 249
Query: 155 XXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPSED 214
LL+WW HY+WPYP+E EKV L+E TGLDQKQINNWFINQRKRHWKPSED
Sbjct: 250 GKLPKDARQKLLNWWELHYKWPYPSETEKVALAETTGLDQKQINNWFINQRKRHWKPSED 309
Query: 215 MRFALMEGVSVSSSMIGGPSYFDTGG 240
M+F +M+G+ ++ + S++ G
Sbjct: 310 MQFMVMDGLHPQNAALYMESHYMGDG 335
>GSVIVT01013790001 assembled CDS
Length = 318
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 86/133 (64%), Gaps = 5/133 (3%)
Query: 92 RFLADEAAGTSEEELSCGEIEASESQESSGGRPNDQDVKGMLMRKYSGYLSNXXXXXXXX 151
R L DEA +S+E+ S GE E E+Q R DQ++K L+R++ G +S+
Sbjct: 184 RSLPDEAVVSSDEDFSGGE-EVQEAQ----PRGEDQELKERLLRRFGGRISSLKLEFSKK 238
Query: 152 XXXXXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
LL+WWN HY+WPYPTE +K+ L+E TGLDQKQINNWFINQRKRHWKP
Sbjct: 239 KKKGKLPKEARQTLLEWWNLHYKWPYPTEADKIALAETTGLDQKQINNWFINQRKRHWKP 298
Query: 212 SEDMRFALMEGVS 224
SE+M+FA+M+ S
Sbjct: 299 SENMQFAVMDNHS 311
>GSVIVT01030488001 assembled CDS
Length = 248
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 87 FFSLKRFLADEAAGTSEEELSCGEIEASESQESSGGRPNDQDVKGMLMRKYSGYLSNXXX 146
F +L +D G+ + E E + + D+++KG L+RKYSGYL +
Sbjct: 89 FKALTVAPSDSVCGSYAGRVGSSEEEVDGNDTCIDPQAEDRELKGQLLRKYSGYLGSLKQ 148
Query: 147 XXXXXXXXXXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRK 206
LLDWW+ HY+WPYP+E +K+ L+E TGLDQKQINNWFINQRK
Sbjct: 149 EFLKKKKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRK 208
Query: 207 RHWKPSEDMRFALMEGVSVS---SSMIGGPSYFD 237
RHWKPSEDM+F +M+ S++G P D
Sbjct: 209 RHWKPSEDMQFVVMDATHPHYYMDSVMGNPFPMD 242
>GSVIVT01004811001 assembled CDS
Length = 249
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
Query: 87 FFSLKRFLADEAAGTSEEELSCGEIEASESQESSGGRPNDQDVKGMLMRKYSGYLSNXXX 146
F +L +D A G + E E + + D+++KG L+RKYSGYLS+
Sbjct: 89 FKALTVSSSDSAGGEGLDRNGSSEEEVDVNNNFIDPQAEDRELKGQLLRKYSGYLSSLKQ 148
Query: 147 XXXXXXXXXXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRK 206
LLDWW+ HY+WPYP+E +K+ L+E TGLDQKQINNWFINQRK
Sbjct: 149 EFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRK 208
Query: 207 RHWKPSEDMRFALME----GVSVSSSMIGGPSYFD 237
RHWKPSEDM+F +M+ G +++G P D
Sbjct: 209 RHWKPSEDMQFVVMDATHPGHYYMDNVLGNPFPMD 243
>GSVIVT01019880001 assembled CDS
Length = 291
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 38/47 (80%)
Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHW 209
++L +WW H +WPYPTED+K KL E TGL KQINNWFINQRKR+W
Sbjct: 229 SVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 275
>GSVIVT01035921001 assembled CDS
Length = 219
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 38/47 (80%)
Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHW 209
++L WW +H +WPYPTE++K KL + TGL KQINNWFINQRKR+W
Sbjct: 145 SVLKAWWQSHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKRNW 191
>GSVIVT01012897001 assembled CDS
Length = 413
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 38/47 (80%)
Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHW 209
++L WW +H +WPYPTE++K +L + TGL KQINNWFINQRKR+W
Sbjct: 340 SLLKAWWQSHSKWPYPTEEDKARLVQETGLHLKQINNWFINQRKRNW 386
>GSVIVT01034073001 assembled CDS
Length = 561
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
T+L W H+ PYPT+ +K+ L++ TGL + Q++NWFIN R R WKP
Sbjct: 355 TVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKP 403
>GSVIVT01009779001 assembled CDS
Length = 470
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
IL W H+ PYP + EK+ L+ TGL + Q++NWFIN R R WKP
Sbjct: 382 AILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKP 430
>GSVIVT01009781001 assembled CDS
Length = 528
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
+IL W H+ PYP + EK+ L+ TGL + Q+ NWFIN R R WKP
Sbjct: 336 SILRTWLFEHFLHPYPKDSEKIMLARQTGLTRSQVANWFINARVRLWKP 384
>GSVIVT01024224001 assembled CDS
Length = 583
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
+IL W H+ PYP + +K+ L+ TGL + Q++NWFIN R R WKP
Sbjct: 374 SILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 422
>GSVIVT01025220001 assembled CDS
Length = 746
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
IL W H+ PYPT+ +K L+ TGL + Q++NWFIN R R WKP
Sbjct: 640 AILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKP 688
>GSVIVT01019043001 assembled CDS
Length = 678
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 164 ILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
IL W H+ PYP++ +K L+ TGL + Q++NWFIN R R WKP
Sbjct: 481 ILRSWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 528
>GSVIVT01037575001 assembled CDS
Length = 573
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
++L W H+ PYP + +K L++ TGL + Q++NWFIN R R WKP
Sbjct: 342 SVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKP 390
>GSVIVT01009633001 assembled CDS
Length = 349
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 164 ILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
IL W H+ PYP++ +K LS TGL + Q++NWFIN R R WKP
Sbjct: 138 ILRAWLFEHFLHPYPSDADKHLLSRQTGLSRNQVSNWFINARVRLWKP 185
>GSVIVT01016458001 assembled CDS
Length = 935
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
+L W H+ PYPT+ EK L++ T L + Q++NWFIN R R WKP
Sbjct: 766 AVLRAWLFEHFLHPYPTDLEKQILAQRTSLSRNQVSNWFINARVRLWKP 814
>GSVIVT01011146001 assembled CDS
Length = 489
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
++L W H+ PYP + +K L++ TGL + Q++NWFIN R R WKP
Sbjct: 341 SVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKP 389
>GSVIVT01019399001 assembled CDS
Length = 445
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
++L W H+ PYP++ +K L+ TGL + Q++NWFIN R R WKP
Sbjct: 260 SVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKP 308
>GSVIVT01035361001 assembled CDS
Length = 344
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
++L W ++ PYP + EK L+ +GL + Q++NWFIN R R WKP
Sbjct: 256 SVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKP 304