Jatropha Genome Database

JcSR397681f.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcSR397681f.10 - phase: 1 /partial
         (368 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29713.m000178 acyl-CoA oxidase, putative                              414   e-115

>29713.m000178 acyl-CoA oxidase, putative
          Length = 708

 Score =  414 bits (209), Expect = e-115
 Identities = 311/345 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggagggtgaagatcacttgagagaccctaaattccagttggatgccttcagataccgaa 60
           |||| |||||||| ||| | || || |||||||||||||| |||||||||||||| ||||
Sbjct: 209 gggaaggtgaagaacacctaagggatcctaaattccagttagatgccttcagatatcgaa 268

                                                                       
Query: 61  catctcgactgcttcaaagtgttgctgtccgacttcgcaagcactctaaaagtcttggta 120
           |||||||| | ||||||||||||||||||||||| |||||||| ||||||| |||||| |
Sbjct: 269 catctcgattacttcaaagtgttgctgtccgactccgcaagcattctaaaactcttggaa 328

                                                                       
Query: 121 gctttggtgcttggaatcggtgcttgaatcaccttctcacacttgcagaatctcacgttg 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 329 gctttggtgcttggaatcggtgcttgaatcaccttctcacacttgcagaatctcacattg 388

                                                                       
Query: 181 aatccgtgatccttgcaaaatttattgaagctgtgcagaattgtcctgatgcaagctctc 240
           |||| |||||||||||||| |||||||||||||| ||||||||||||||| | || ||||
Sbjct: 389 aatctgtgatccttgcaaagtttattgaagctgtacagaattgtcctgatcctagttctc 448

                                                                       
Query: 241 gagctgctttaaaacttgtctgtgatctttatgccttggaccggatctggaatgacattg 300
           |||| ||||| |||||||| |||||||||||||||||||| ||||| |||| |||||| |
Sbjct: 449 gagcggctttgaaacttgtttgtgatctttatgccttggatcggatttggagtgacatag 508

                                                        
Query: 301 gaacataccgcaatgttgactatgttgcaccaaacaaagctaagg 345
           |||| || || |||||||| || ||||||||||||||||| ||||
Sbjct: 509 gaacgtatcggaatgttgattacgttgcaccaaacaaagccaagg 553