Jatropha Genome Database
- JcSR000334f.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcSR000334f.10 - phase: 1 /partial
(628 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27856.m000040 1-aminocyclopropane-1-carboxylate oxidase, putative 371 e-102
49629.m000013 1-aminocyclopropane-1-carboxylate oxidase, putative 238 3e-62
29648.m001983 1-aminocyclopropane-1-carboxylate oxidase, putative 62 4e-09
>27856.m000040 1-aminocyclopropane-1-carboxylate oxidase, putative
Length = 594
Score = 371 bits (187), Expect = e-102
Identities = 415/489 (84%), Gaps = 4/489 (0%)
Strand = Plus / Plus
Query: 108 atgaaggaatttgcagcccagttagagaaactggcagaggagttgctagatttgctgtgt 167
|||||||||||||||| |||| |||||| ||||||||||| | || || || | |||
Sbjct: 1 atgaaggaatttgcagtgaagttggagaaattggcagaggagcttcttgacctgttatgt 60
Query: 168 gagaatcttggtcttgagaaagggtacctaaagaaggcgttttatgggtcaagtggatcg 227
||||| ||||| ||||||||||||||||| || || | |||||||||||||| |||
Sbjct: 61 gagaaccttggacttgagaaagggtacctgaaaaacacattttatgggtcaagagga--- 117
Query: 228 ccaacctttgggacaaaggttagcaactatccaccatgccctaaaccagacttgatcaaa 287
||||||||||||||||||||||||||||| ||||| ||||| || |||||| | || ||
Sbjct: 118 ccaacctttgggacaaaggttagcaactacccaccttgccccaagccagacctaattaag 177
Query: 288 ggactcagggcccacacagatgcaggtggcatcatcttgttgtttcaagatgataaggtc 347
||||||||||||||||| ||||| ||||||||||| | |||| || ||||||||||||
Sbjct: 178 ggactcagggcccacacggatgctggtggcatcattctactgttccaggatgataaggtc 237
Query: 348 agtggccttcaactcctcaaagatggccactgggttgatgtccctccgatgcgtcactcc 407
||||| ||||| || || |||||||| || ||| ||||||| ||||| ||||| ||||||
Sbjct: 238 agtggtcttcagcttcttaaagatgggcagtggattgatgtgcctcctatgcgccactcc 297
Query: 408 attgtcatcaaccttggagaccaaattgaggtaataacaaatgggaaatacaagagtgta 467
||||| |||| ||||| |||||| ||||||| || || ||||| || |||||||||||
Sbjct: 298 attgttgtcaatcttggcgaccaacttgaggtgattaccaatggaaagtacaagagtgtg 357
Query: 468 gagcacagagtggtggctcaaacagatggaacaagaatgtcaatagcttcattttacaac 527
|||||| |||| |||||||| ||||| ||||| || ||||||||||||||||| ||||||
Sbjct: 358 gagcaccgagttgtggctcagacagacggaaccaggatgtcaatagcttcattctacaac 417
Query: 528 ccaggaagtgatgcagtgatatatccagcaccagctttg-tggagaaagaagcagaagag 586
||||||||||||||||| || || ||||||||||||||| |||||||||||||||| | |
Sbjct: 418 ccaggaagtgatgcagtaatctacccagcaccagctttgttggagaaagaagcagagggg 477
Query: 587 aaaaaacaa 595
|| ||||||
Sbjct: 478 aagaaacaa 486
>49629.m000013 1-aminocyclopropane-1-carboxylate oxidase, putative
Length = 948
Score = 238 bits (120), Expect = 3e-62
Identities = 326/394 (82%), Gaps = 3/394 (0%)
Strand = Plus / Plus
Query: 156 gatttgctgtgtgagaatcttggtcttgagaaagggtacctaaagaaggcgttttatggg 215
||||||||||||||||||||||| || ||| | || ||||| || ||||| || |||||
Sbjct: 388 gatttgctgtgtgagaatcttgggctggagcagggatacctgaaaaaggcattctatgga 447
Query: 216 tcaagtggatcgccaacctttgggacaaaggttagcaactatccaccatgccctaaacca 275
|||| ||| || |||||||| ||||| || |||||||| || || || || || |||
Sbjct: 448 tcaaaaggaccg---acctttggcacaaaagtaagcaactaccctccgtgtccaaagcca 504
Query: 276 gacttgatcaaaggactcagggcccacacagatgcaggtggcatcatcttgttgtttcaa 335
||| | |||||||| || |||||||| |||||||||||||||||||| || ||||||||
Sbjct: 505 gacctaatcaaagggctgagggcccatacagatgcaggtggcatcattttactgtttcaa 564
Query: 336 gatgataaggtcagtggccttcaactcctcaaagatggccactgggttgatgtccctccg 395
||||||||||| |||||||| || | || || |||||||| ||||| ||||| || ||
Sbjct: 565 gatgataaggtgagtggcctccagttgcttaaggatggccaatgggtggatgtgccccct 624
Query: 396 atgcgtcactccattgtcatcaaccttggagaccaaattgaggtaataacaaatgggaaa 455
||| |||||||||||||||||| | || |||||| |||||||||| | ||||| |||
Sbjct: 625 atgaaacactccattgtcatcaacttaggtgaccaacttgaggtaattagcaatggaaaa 684
Query: 456 tacaagagtgtagagcacagagtggtggctcaaacagatggaacaagaatgtcaatagct 515
||||||||||| |||| | ||| | |||||||| |||||||| || ||||||||||||
Sbjct: 685 tacaagagtgtgatgcaccgggtgattgctcaaacggatggaaccaggatgtcaatagct 744
Query: 516 tcattttacaacccaggaagtgatgcagtgatat 549
|||||||||||||| ||||||||||| |||||||
Sbjct: 745 tcattttacaacccgggaagtgatgcggtgatat 778
>29648.m001983 1-aminocyclopropane-1-carboxylate oxidase, putative
Length = 930
Score = 61.9 bits (31), Expect = 4e-09
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 300 cacacagatgcaggtggcatcatcttgttgtttcaagatgataaggtcagtggccttcaa 359
||||||||||| || || |||||||| | || ||||||||| |||| | |||||||||
Sbjct: 538 cacacagatgctgggggtgtcatcttgctattccaagatgatgaggtgggaggccttcaa 597
Query: 360 ctcctcaaagatggccactgggttgatgtcc 390
||||||||||||| || ||| |||||||||
Sbjct: 598 atcctcaaagatgggcaatggattgatgtcc 628