Jatropha Genome Database

JcPR14IO7F0.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR14IO7F0.10 + phase: 2 /pseudo/partial/short
         (119 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30027.m000845 Ubiquitin carboxyl-terminal hydrolase, putative          90   3e-18

>30027.m000845 Ubiquitin carboxyl-terminal hydrolase, putative
          Length = 2376

 Score = 89.7 bits (45), Expect = 3e-18
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                        
Query: 14   cagagcttaaaaacggcatttgagatggctcctgctgacccaactgtggacttgaatatg 73
            |||||||||||||| |||||| |||||||||||||||| |||||| | ||||||||||||
Sbjct: 1018 cagagcttaaaaacagcatttcagatggctcctgctgatccaactttagacttgaatatg 1077

                 
Query: 74   cagtt 78
            |||||
Sbjct: 1078 cagtt 1082