Jatropha Genome Database

JcPR13H21R2.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR13H21R2.10 + phase: 2 /pseudo/partial
         (327 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29709.m001223 ribose-phosphate pyrophosphokinase, putative            202   9e-52
30054.m000790 ribose-phosphate pyrophosphokinase, putative             88   4e-17
30054.m000794 ribose-phosphate pyrophosphokinase, putative             80   9e-15

>29709.m001223 ribose-phosphate pyrophosphokinase, putative
          Length = 1125

 Score =  202 bits (102), Expect = 9e-52
 Identities = 135/146 (92%)
 Strand = Plus / Plus

                                                                       
Query: 147 agactcaagggcgtgaatccattgctgccaaacttgttgcaaatttgattacagaagctg 206
           ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 479 agactcaagggcgtgaatccattgctgccaaacttgttgcaaatttgataactgaagccg 538

                                                                       
Query: 207 gtgtaaaccgtgttcttgcttgtgaccttcactctgggcagtcaatggggtattttgaca 266
           ||| ||| ||||| || |||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 539 gtgcaaatcgtgtgctcgcttgtgatcttcattctggccagtcaatggggtattttgaca 598

                                     
Query: 267 ttcctgtggatcatgtatatggtcag 292
           |||| |||||||||||||||||||||
Sbjct: 599 ttcccgtggatcatgtatatggtcag 624


>30054.m000790 ribose-phosphate pyrophosphokinase, putative
          Length = 1188

 Score = 87.7 bits (44), Expect = 4e-17
 Identities = 80/92 (86%)
 Strand = Plus / Plus

                                                                       
Query: 158 cgtgaatccattgctgccaaacttgttgcaaatttgattacagaagctggtgtaaaccgt 217
           ||||||||||||||||||||||||||||||||  | || || ||||| |||| ||| |||
Sbjct: 553 cgtgaatccattgctgccaaacttgttgcaaaccttatcactgaagcaggtgcaaatcgt 612

                                           
Query: 218 gttcttgcttgtgaccttcactctgggcagtc 249
           ||||||| ||||||  |||| |||||||||||
Sbjct: 613 gttcttgtttgtgatattcattctgggcagtc 644


>30054.m000794 ribose-phosphate pyrophosphokinase, putative
          Length = 1056

 Score = 79.8 bits (40), Expect = 9e-15
 Identities = 112/136 (82%)
 Strand = Plus / Plus

                                                                       
Query: 147 agactcaagggcgtgaatccattgctgccaaacttgttgcaaatttgattacagaagctg 206
           |||||||||| |||||||| ||||| || ||||||||||||||  | || || ||||| |
Sbjct: 410 agactcaaggtcgtgaatctattgcagctaaacttgttgcaaaccttatcactgaagcag 469

                                                                       
Query: 207 gtgtaaaccgtgttcttgcttgtgaccttcactctgggcagtcaatggggtattttgaca 266
           ||| ||||||||| || ||||||||  |||| |||||||| || ||||| || ||||| |
Sbjct: 470 gtgcaaaccgtgtcctcgcttgtgatattcattctgggcaatctatgggttactttgata 529

                           
Query: 267 ttcctgtggatcatgt 282
           | ||||| || |||||
Sbjct: 530 tccctgttgaccatgt 545