Jatropha Genome Database

JcPR04JCLS5.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR04JCLS5.10 + phase: 1 /pseudo/partial
         (374 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014165 Myosin heavy chain, striated muscle, putative           327   3e-89

>30170.m014165 Myosin heavy chain, striated muscle, putative
          Length = 3126

 Score =  327 bits (165), Expect = 3e-89
 Identities = 276/313 (88%)
 Strand = Plus / Plus

                                                                        
Query: 2    agaaatcaatagtcctgattgcatagataaggttgccttaccagagaataaggttcttca 61
            ||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2073 agaaatcaatagctctgattgcattgataaggttgccttaccagagaataaggttcttca 2132

                                                                        
Query: 62   aagggactgctcaggagaaaggtatcaaaatggttgtgcccacatttctagccctacctc 121
             ||||| |  || |||||||| ||||||||  ||||||| ||||||||||| ||||| ||
Sbjct: 2133 gagggattcatctggagaaagctatcaaaacagttgtgcacacatttctagtcctacatc 2192

                                                                        
Query: 122  taaccctgaggtccctgatgatgggaacttggtatcaggctatgggtcaaatacaacatt 181
            ||| ||||||||||||||||||||||  ||||||||||||||||| || ||||| |||||
Sbjct: 2193 taatcctgaggtccctgatgatgggagtttggtatcaggctatggatcgaataccacatt 2252

                                                                        
Query: 182  atgcaaagtctcactagaggaatttgaagaactgaaaacagagaaagataacatggccat 241
             ||||||||||| || ||||||||||||||| ||||| |||||||| | ||| | ||| |
Sbjct: 2253 gtgcaaagtctctctggaggaatttgaagaattgaaatcagagaaaaacaacgttgcctt 2312

                                                                        
Query: 242  ggatcttgctaggtgcactgaaaacctagaaatgaccaaatcccaattacatgaaaccga 301
            ||||||||||||||||||||| ||||| |||||||| || || ||||| |||||||| ||
Sbjct: 2313 ggatcttgctaggtgcactgagaacctggaaatgacaaagtctcaattgcatgaaactga 2372

                         
Query: 302  gcagcttctagct 314
            |||||||||||||
Sbjct: 2373 gcagcttctagct 2385