Jatropha Genome Database

JcPR04F24VT.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR04F24VT.10 + phase: 0 /partial
         (240 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29854.m001115 DNA primase, putative                                   155   1e-37

>29854.m001115 DNA primase, putative
          Length = 1548

 Score =  155 bits (78), Expect = 1e-37
 Identities = 138/158 (87%)
 Strand = Plus / Plus

                                                                       
Query: 19  gatgggaagcatcctgcctgtgacaagtcctactttggtcgtagagagttttcttttact 78
           ||||||||||||||||| |||||||||||||||||||| || |||||||| ||||| |||
Sbjct: 145 gatgggaagcatcctgcttgtgacaagtcctactttggacgaagagagttctctttcact 204

                                                                       
Query: 79  ctggataatgacatttatttgcggtttcagtctttcaacaatgagtctgaactggagaat 138
           || ||||||||||||||| | || || ||||||||||||||||| ||  || || ||| |
Sbjct: 205 cttgataatgacatttatctacgattccagtctttcaacaatgaatcccaattgaagact 264

                                                 
Query: 139 tccataaaagagaaatgtccatttaaaatagatattgg 176
           ||||| ||||| ||||| || |||||||||||||||||
Sbjct: 265 tccattaaagacaaatgcccttttaaaatagatattgg 302