Jatropha Genome Database

JcPR03EVQAR.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR03EVQAR.10 + phase: 0 /partial/short
         (138 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008849 beta-tubulin cofactor d, putative                       165   8e-41

>30174.m008849 beta-tubulin cofactor d, putative
          Length = 3783

 Score =  165 bits (83), Expect = 8e-41
 Identities = 101/107 (94%)
 Strand = Plus / Plus

                                                                       
Query: 21  cagcttcattgaatggacacatgaagtattatcttctggaacagatgatgtcatgtctca 80
           |||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||||||
Sbjct: 735 cagcttcactgaatggacacatgaggtactatcttctggcacagatgatgtcatgtctca 794

                                                          
Query: 81  ctttcggttactaggtgttgtggaagcattggctgccattttcaagg 127
           ||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 795 ctttcagttactaggtgttgtggaagcactggctgccattttcaagg 841