Jatropha Genome Database

JcPR03AU11F.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR03AU11F.10 - phase: 1 /partial/short
         (140 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27561.m000300 DAG protein, chloroplast precursor, putative            149   5e-36

>27561.m000300 DAG protein, chloroplast precursor, putative
          Length = 747

 Score =  149 bits (75), Expect = 5e-36
 Identities = 114/127 (89%)
 Strand = Plus / Plus

                                                                       
Query: 11  tgtgaatggagagatagttcaaagatcacccgaaagacagagaagggtggagccacaacc 70
           ||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||| ||
Sbjct: 615 tgtgaatggagagatagttcagagatcacctgaaagacagagaagagtggaaccacagcc 674

                                                                       
Query: 71  ccaaagagcaaatgacagacccagatacaatgacagaactcgatacgttcgccgcagaga 130
            || ||||| || ||||||||||||||||||||||||||  ||||||| || ||||||||
Sbjct: 675 acagagagctaacgacagacccagatacaatgacagaaccagatacgtgcgtcgcagaga 734

                  
Query: 131 aaatatg 137
           |||||||
Sbjct: 735 aaatatg 741