Jatropha Genome Database

JcPR03AIW3S.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR03AIW3S.10 - phase: 1 /partial
         (272 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007139 arginine decarboxylase, putative                        228   1e-59

>30131.m007139 arginine decarboxylase, putative
          Length = 2175

 Score =  228 bits (115), Expect = 1e-59
 Identities = 190/215 (88%)
 Strand = Plus / Plus

                                                                        
Query: 55   tgtcaagtgcagctgcatcaatgacttctgcagggtttcagtattttgtggatggactta 114
            |||| ||||| || || ||||||||||| || |||||||||||| || |||| || ||| 
Sbjct: 1244 tgtctagtgctgcagcttcaatgacttcagctgggtttcagtatcttatggaggggcttg 1303

                                                                        
Query: 115  cggaggatgcaatttctgattacagaaacttaacatctgcagctatgagaggtgagaacg 174
            ||||||| || ||||| ||||| || || |||||| |||||||| ||||||||||| | |
Sbjct: 1304 cggaggaagctatttcggattataggaatttaacagctgcagctgtgagaggtgagtatg 1363

                                                                        
Query: 175  atacctgcttgctctatgctgaccaattgaaacaaagatgtgttgatcagttcaaagaag 234
            |||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1364 atacttgcttgctttatgctgaccaattgaaacaaagatgtgttgatcagtttaaagaag 1423

                                               
Query: 235  gtagtatcggtatggaacaattagctgctgttgat 269
            ||||||||||||||||||| |||||||||||||||
Sbjct: 1424 gtagtatcggtatggaacagttagctgctgttgat 1458