Jatropha Genome Database

JcPR02IGLIS.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR02IGLIS.10 + phase: 0 /pseudo/partial
         (493 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29883.m001967 cyclophilin, putative                                   151   5e-36

>29883.m001967 cyclophilin, putative
          Length = 2067

 Score =  151 bits (76), Expect = 5e-36
 Identities = 125/140 (89%), Gaps = 1/140 (0%)
 Strand = Plus / Plus

                                                                        
Query: 293  agcgcgttagaaaaggacgtggcttcactgagcgttattcctttgcacgtcgataccgca 352
            |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 1493 agcgagttagaaaaggacgtggcttcactgatcgttattcctttgcacgccgataccgca 1552

                                                                        
Query: 353  ccccctctcccagagaaatcacctcggaggccctaccgttatggtggaagaaatattaat 412
            | || ||| ||||| ||||||||| ||||| || ||| |||||||||||||||||| || 
Sbjct: 1553 ctccttct-ccagataaatcaccttggaggtcccaccattatggtggaagaaatataaac 1611

                                
Query: 413  gaaagaaaccgtgataggta 432
            || ||||||||||| |||||
Sbjct: 1612 gacagaaaccgtgacaggta 1631