Jatropha Genome Database

JcPR01E1J32.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR01E1J32.10 + phase: 0 
         (174 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30008.m000798 3-isopropylmalate dehydratase, putative                 147   2e-35
30008.m000797 3-isopropylmalate dehydratase, putative                 117   2e-26

>30008.m000798 3-isopropylmalate dehydratase, putative
          Length = 1866

 Score =  147 bits (74), Expect = 2e-35
 Identities = 125/142 (88%)
 Strand = Plus / Plus

                                                                        
Query: 33   ggtttgtgtgtcaacaacaaaccgaaacttccctggccgtatgggtcacagagaggggca 92
            ||||||||| |||||||| ||| |||||||||| || || ||||| |||| ||| || ||
Sbjct: 1725 ggtttgtgtctcaacaaccaacagaaacttccccggtcggatgggacacaaagaaggtca 1784

                                                                        
Query: 93   gatatatctggcctccccctacacagcagcagcatctgctttgactggttatgtcactga 152
             |||||||| || || || || ||||||||||||||||||||||||||||||||||||||
Sbjct: 1785 aatatatcttgcttctccgtatacagcagcagcatctgctttgactggttatgtcactga 1844

                                  
Query: 153  tccaagagagttcttacagtag 174
            ||||||||||||||| ||||||
Sbjct: 1845 tccaagagagttcttgcagtag 1866


>30008.m000797 3-isopropylmalate dehydratase, putative
          Length = 1533

 Score =  117 bits (59), Expect = 2e-26
 Identities = 113/131 (86%)
 Strand = Plus / Plus

                                                                        
Query: 37   tgtgtgtcaacaacaaaccgaaacttccctggccgtatgggtcacagagaggggcagata 96
            ||||| ||||| |||||| ||||||||||||| || ||||| |||| ||| || ||||| 
Sbjct: 1396 tgtgtttcaacgacaaacagaaacttccctggtcggatgggacacaaagaaggccagatt 1455

                                                                        
Query: 97   tatctggcctccccctacacagcagcagcatctgctttgactggttatgtcactgatcca 156
            ||||| || || ||||| ||||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 1456 tatcttgcttcgccctatacagccgctgcatcagctttgactggttatgttactgatcca 1515

                       
Query: 157  agagagttctt 167
            |||||||||||
Sbjct: 1516 agagagttctt 1526