Jatropha Genome Database

JcPR01DAKSA.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR01DAKSA.10 + phase: 0 /partial
         (201 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008781 lipoxygenase, putative                                  141   2e-33

>30128.m008781 lipoxygenase, putative
          Length = 2616

 Score =  141 bits (71), Expect = 2e-33
 Identities = 154/181 (85%), Gaps = 3/181 (1%)
 Strand = Plus / Plus

                                                                        
Query: 16   actttgaagccattagcaattgagttaagcttgcctcatcctgaaggtgatcaattcgga 75
            |||||||||||| | || ||||| |||||||||||||||||||| || ||| |||| |||
Sbjct: 1420 actttgaagccagttgccattgaattaagcttgcctcatcctgagggagatgaatttgga 1479

                                                                        
Query: 76   gccgttagcaaagtatgcacaccagctgaggatg---gtgttgaaggttctatttggctg 132
            ||| ||| ||||||||||||||||||||| ||||   ||||||||||||| |||||||  
Sbjct: 1480 gccattaacaaagtatgcacaccagctgaagatggcagtgttgaaggttccatttggcaa 1539

                                                                        
Query: 133  ttggctaaagcttatgtgggtgtagtcgactctggcgttcaccagcttatcagtcactgg 192
             | || ||||||||||||| |||| | |||||||| |||||||| || ||||| ||||||
Sbjct: 1540 ctagccaaagcttatgtggctgtaattgactctggtgttcaccaactgatcagccactgg 1599

             
Query: 193  t 193
            |
Sbjct: 1600 t 1600