Jatropha Genome Database

JcPR01BVAYK.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR01BVAYK.10 + phase: 0 /partial
         (193 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29732.m000316 NOI, putative                                           172   5e-43
29629.m001408 NOI, putative                                            92   1e-18

>29732.m000316 NOI, putative
          Length = 234

 Score =  172 bits (87), Expect = 5e-43
 Identities = 108/115 (93%)
 Strand = Plus / Plus

                                                                       
Query: 10  ccaaagtttggtgaatgggatgtcaatgacccagcatcagctgagggattcacagtcatc 69
           ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 25  ccaaagtttggtgaatgggatgttaatgacccagcatctgctgagggattcacagttatc 84

                                                                  
Query: 70  ttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgactcgccagcaa 124
           || ||||||||| | ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 85  tttaacaaggctaggaatgagaaaaagacaggtggaaagcctgattcgccagcaa 139


>29629.m001408 NOI, putative
          Length = 294

 Score = 91.7 bits (46), Expect = 1e-18
 Identities = 97/114 (85%)
 Strand = Plus / Plus

                                                                       
Query: 3   accattaccaaagtttggtgaatgggatgtcaatgacccagcatcagctgagggattcac 62
           |||||| ||||| ||||||||||||||||| ||||| || || |||||||||||||| ||
Sbjct: 24  accattgccaaaatttggtgaatgggatgttaatgatcctgcttcagctgagggatttac 83

                                                                 
Query: 63  agtcatcttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgactc 116
            || ||||||||||||||| |  ||||||| ||||| || || || ||||||||
Sbjct: 84  tgtgatcttcaacaaggctagggatgagaagaagacgggcggcaaacctgactc 137