Jatropha Genome Database

JcCD0139598.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0139598.10 + phase: 1 /partial
         (251 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004583 isopentenyl-diphosphate delta isomerase, putative       240   3e-63

>29929.m004583 isopentenyl-diphosphate delta isomerase, putative
          Length = 945

 Score =  240 bits (121), Expect = 3e-63
 Identities = 193/217 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgattatctgctcttcatagttcgtgatgttaatgtaaatccaaaccctaatgaggtag 60
           |||||||||||||||| || || |||||||| |||||||| ||||||||| |||||||||
Sbjct: 692 ttgattatctgctctttatggtccgtgatgtcaatgtaaacccaaaccctgatgaggtag 751

                                                                       
Query: 61  ctgatatcaagtacgttaaccgagatcagttgaaggaactattaaggaaagcagatgctg 120
           | ||| | ||||| || ||||||||||| |||||||| || || |||||||||||||| |
Sbjct: 752 cggatgttaagtatgtcaaccgagatcaattgaaggagctcttgaggaaagcagatgcag 811

                                                                       
Query: 121 gtgaggaaggtttgaagctgtcaccatggtttagactagttgttgacaacttcttgttca 180
           | |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||
Sbjct: 812 gagaggaaggtttgaagctgtcgccgtggtttagactagttgtagacaacttcttgttca 871

                                                
Query: 181 aatggtgggaacatgttgagcaggggacactcaagga 217
           |||||||||| |||| |||| |||| |||||||||||
Sbjct: 872 aatggtgggagcatgctgagaagggaacactcaagga 908