Jatropha Genome Database

JcCD0108263.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0108263.10 - phase: 2 /pseudo/partial
         (326 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29506.m000169 dynamin, putative                                       188   1e-47

>29506.m000169 dynamin, putative
          Length = 2514

 Score =  188 bits (95), Expect = 1e-47
 Identities = 173/199 (86%)
 Strand = Plus / Plus

                                                                        
Query: 18   agatggattatataaacacctcacatccaaattttattggcggtagtaaggctgtggaga 77
            ||||||| || ||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 1520 agatggactacataaacacctcacatccaaattttattggtgggagtaaggctgtggaga 1579

                                                                        
Query: 78   ttgcactgcaacaagtcaagtcttctagggctgttcctctctctttgagacaaaaggatg 137
             ||| ||||||||  | |||||  ||||||||||| ||||  || || | || |||||||
Sbjct: 1580 ctgccctgcaacagataaagtccgctagggctgtttctctacctatgcggcagaaggatg 1639

                                                                        
Query: 138  gtgcagaacctgataaggcaccagcatcagagaggaccctcaagtctcgggctattcttg 197
            ||  ||| | |||||||||||| ||||||||||||| | ||||||| |||||||||||||
Sbjct: 1640 gtatagagcttgataaggcaccggcatcagagaggagcgtcaagtcccgggctattcttg 1699

                               
Query: 198  ccagacaagtaaatggagt 216
            |||||||||||||||||||
Sbjct: 1700 ccagacaagtaaatggagt 1718