Jatropha Genome Database

JcCD0100451.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0100451.10 + phase: 0 /pseudo/partial
         (442 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m010985 prohibitin, putative                                    224   3e-58

>30190.m010985 prohibitin, putative
          Length = 840

 Score =  224 bits (113), Expect = 3e-58
 Identities = 258/300 (86%), Gaps = 6/300 (2%)
 Strand = Plus / Plus

                                                                       
Query: 140 attgccccaaatctatcaacgccttggtcttgagtatgatgagaaggtgctaccctcaat 199
           ||||||| | |||| ||||| |||||||||||| ||||||||||||||||| || |||||
Sbjct: 321 attgccctatatctttcaacaccttggtcttgaatatgatgagaaggtgcttccttcaat 380

                                                                       
Query: 200 tggcaatgaggttttgaaggctgtggttgcacagttcaatgctgaccagctcctcacaga 259
           ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 381 tggaaatgaggttttgaaggctgtggttgcacagttcaatgctgatcagctccttacaga 440

                                                                       
Query: 260 acgtccgcatgtatcagctctggtccgtgactctcttatcaagcgcgcaaaggatttcaa 319
           |||||| ||||| ||||| || || || || ||||| |||||||| || ||||| || ||
Sbjct: 441 acgtccccatgtgtcagcgcttgttcgcgaatctctcatcaagcgtgctaaggactttaa 500

                                                                       
Query: 320 cattctgcttggaagatgtggcaatcacccacttgtcttataggagtggtacgttctcga 379
           |||| ||| |||| |||||||||||||| ||||| |||||| ||| |||   |||||| |
Sbjct: 501 cattgtgc-tggatgatgtggcaatcactcacttatcttat-ggaatgg--agttctc-a 555

                                                                       
Query: 380 agggctgtggagacaaaagcaagtggcgcagcaggaagctgagaggtccaagttcattgt 439
           || ||||| || ||| || || ||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 556 agagctgttga-acagaaacaggtggcacagcaagaagctgagagatccaagttcattgt 614