Jatropha Genome Database

JcCD0077184.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0077184.10 + phase: 0 /partial
         (391 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004547 ornithine decarboxylase, putative                       172   1e-42

>29929.m004547 ornithine decarboxylase, putative
          Length = 612

 Score =  172 bits (87), Expect = 1e-42
 Identities = 286/351 (81%), Gaps = 1/351 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgataagcaagaagaagctgaacccttttatcttattgatttaggggttgttataaga 60
           ||||| || |||||||| || |||||||||||| || | ||| |||||||||| ||||| 
Sbjct: 139 tctgagaatcaagaagaggcggaacccttttatattctcgatataggggttgtcataagc 198

                                                                       
Query: 61  ctaatggataaatggaatcaatctctgccaaatgtaaaacctttttatgccgttaaatgc 120
           ||  |||| ||||||| |||    || ||  |||| ||||| |||||||| || ||| ||
Sbjct: 199 ctcgtggagaaatggagtcatcacctaccccatgttaaacccttttatgctgtcaaacgc 258

                                                                       
Query: 121 aatactgagcctgcattacttctatcacttgcaacactcggtgcaaactttgactgtgca 180
           |||| |||| ||||||| ||| |    ||||||||||| |||||||||||||||||||| 
Sbjct: 259 aataatgagtctgcattgcttattgttcttgcaacacttggtgcaaactttgactgtgct 318

                                                                       
Query: 181 agtcaagctgagattgaaaccatccttggcctcggtgttaatcctgacaggattgtgtat 240
           ||||| |||||||||||  | ||  | ||||| ||| ||| |||||| |||||| | |||
Sbjct: 319 agtcaggctgagattgaggcaattttgggccttggtattagtcctgataggattctttat 378

                                                                       
Query: 241 gccaatccatgcaagtctgtgtcccatataaaatatgcagctagggttggagtcaacctg 300
           |||||||||||||||  ||| |||||||| || || ||||| || || |||||  |||||
Sbjct: 379 gccaatccatgcaagagtgtctcccatatcaagtacgcagccagagtcggagtatacctg 438

                                                              
Query: 301 acaacctttgattccaagcaagaagttgataagat-aaaaaatggcatcca 350
           ||||| |||||||||||| |||||||||| ||||| | |||||||||||||
Sbjct: 439 acaacttttgattccaaggaagaagttgacaagatcagaaaatggcatcca 489