Jatropha Genome Database

JcCD0069117.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0069117.10 - phase: 1 /partial
         (170 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28408.m000196 cak1, putative                                          174   1e-43

>28408.m000196 cak1, putative
          Length = 1200

 Score =  174 bits (88), Expect = 1e-43
 Identities = 148/168 (88%)
 Strand = Plus / Plus

                                                                       
Query: 3   tactttcagatgacattgaagggactagctttttgccataggaaatgggtcttgcatagg 62
           |||||||| ||||||||||| ||| | ||| ||||||| | |||||||||  | ||||||
Sbjct: 346 tactttcaaatgacattgaaaggattggctgtttgccacaagaaatgggttctccatagg 405

                                                                       
Query: 63  gatatgaaaccaaacaacttgttgatagcttctaatggacagcttaaacttggtgacttt 122
           || ||||| |||||||| |||||||||||| ||||||||||||| |||||||  || |||
Sbjct: 406 gacatgaagccaaacaatttgttgatagctcctaatggacagctcaaacttgcagatttt 465

                                                           
Query: 123 ggtttagcacgtatatttggaagcccagatcgcaagttcactcaccaa 170
           |||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 466 ggtttagctcgtatattcggaagcccagatcgcaagttcactcaccaa 513