Jatropha Genome Database
- JcCD0062698.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCD0062698.10 + phase: 0 /partial
(432 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
44978.m000014 conserved hypothetical protein 319 8e-87
30170.m013673 conserved hypothetical protein 244 4e-64
>44978.m000014 conserved hypothetical protein
Length = 1059
Score = 319 bits (161), Expect = 8e-87
Identities = 364/429 (84%), Gaps = 2/429 (0%)
Strand = Plus / Plus
Query: 4 tttcttgatcaagagaaggtgggtgagagactgcatgattcacccagcttgtccatgcta 63
|||||| || ||||||||||||||||||||||||| |||||||| ||||||| ||||||
Sbjct: 232 tttcttaataaagagaaggtgggtgagagactgcaagattcacctggcttgtcaatgcta 291
Query: 64 tcgtccaacattgacatgaaatctaaagaaaacacattctttatttcaaaaggatgttca 123
||||| | ||||| ||||||||||||||| ||||||| ||||||||| || |||
Sbjct: 292 acgtcccaggttgacctgaaatctaaagaaagtccattcttggtttcaaaagaatcatca 351
Query: 124 caaattgagtttggacttgtcaactctgattcacttcttaacccatcacagaatagctct 183
|||||||| |||||||||||||||||||| || || || || || |||||||||||||||
Sbjct: 352 caaattgaatttggacttgtcaactctgactccctcctgaatccttcacagaatagctct 411
Query: 184 tccttgatcagttgtcggaactttggttcttctcaggacctaactgaccaggaaactgtt 243
| || || ||||| | ||||||||||| ||||| || || ||||| || || |||||
Sbjct: 412 cctttaattagttgcagaaactttggttcatctcaagatctcactgatcaagacactgtg 471
Query: 244 tcgcagcattctgttcgccaattcatcgatgattggcctaaaagccagtctgataaatct 303
|| || ||||| || |||||||| || ||||||||||||||||| ||||||||| ||||
Sbjct: 472 tcacaacattcagtgcgccaatttatggatgattggcctaaaagtcagtctgatcgatct 531
Query: 304 tctgtttcatggcctcaacttgatgtgcaatcagatagaactcagttatcaatttcaatc 363
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 532 gctgtttcatggcctcaacttgatgtgcaatcagatagaacccagttatctatttcaatt 591
Query: 364 cctactatagc-tcatacagactacatgtcctccacgtcctcaccaaacaatgaaagagt 422
|| | || | |||| ||||||||||||||||||| ||||| ||||||||||||| |||
Sbjct: 592 ccca-taggtcatcatgcagactacatgtcctccacttcctctccaaacaatgaaaaagt 650
Query: 423 cactctttc 431
||||||||
Sbjct: 651 gactctttc 659
>30170.m013673 conserved hypothetical protein
Length = 1854
Score = 244 bits (123), Expect = 4e-64
Identities = 310/373 (83%), Gaps = 12/373 (3%)
Strand = Plus / Plus
Query: 5 ttcttgatcaagagaaggtgggtgagagactgcatgattcacccagcttgtccatgctat 64
||||| || ||||||| ||||||| |||||||| || ||||||||||||||||||| ||
Sbjct: 1016 ttcttaataaagagaatttgggtgaaagactgcaagactcacccagcttgtccatgcaat 1075
Query: 65 cgtccaacattgacatgaaatctaaagaaaacacattctttatttcaaaa---------- 114
| ||||| ||| || | ||||||||||||||| | ||||| |||||||||
Sbjct: 1076 catccaagatttacctaaaatctaaagaaaaccctttcttcatttcaaaacacccctacc 1135
Query: 115 -gga-tgttcacaaattgagtttggacttgtcaactctgattcacttcttaacccatcac 172
||| | || |||||||| ||||||| ||| |||| ||||| || |||||||| ||||
Sbjct: 1136 aggagtcctcgcaaattgaatttggacatgttaacttcgattctctccttaacccttcac 1195
Query: 173 agaatagctcttccttgatcagttgtcggaactttggttcttctcaggacctaactgacc 232
||||||||||||| || ||||| || | ||||||| |||||||||||| | | || ||
Sbjct: 1196 agaatagctcttcattaatcagctgcagaaactttgcatcttctcaggacatgagtggcc 1255
Query: 233 aggaaactgtttcgcagcattctgttcgccaattcatcgatgattggcctaaaagccagt 292
|||||||| |||| |||||||| ||||||||||||| ||||||||||||||||| || |
Sbjct: 1256 aggaaactatttcacagcattcctttcgccaattcatggatgattggcctaaaagtcaat 1315
Query: 293 ctgataaatcttctgtttcatggcctcaacttgatgtgcaatcagatagaactcagttat 352
||||| |||||||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 1316 ctgatcaatcttctgtctcttggcctcaacttgatgtgcaatcagatagaacccagttat 1375
Query: 353 caatttcaatccc 365
| |||||||||||
Sbjct: 1376 ccatttcaatccc 1388