Jatropha Genome Database

JcCD0062613.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0062613.10 - phase: 0 /partial
         (407 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014290 phospholipase d delta, putative                         414   e-115
28725.m000311 phospholipase d beta, putative                           64   7e-10

>30170.m014290 phospholipase d delta, putative
          Length = 2544

 Score =  414 bits (209), Expect = e-115
 Identities = 314/349 (89%)
 Strand = Plus / Plus

                                                                        
Query: 25   tgctgggaggatatttgtcacgcaatactagaggcgcaccatctggtgtatatagtgggt 84
            ||||||||||||||||||||||| ||| |||| ||||||||| |||||||| |||| |||
Sbjct: 688  tgctgggaggatatttgtcacgctatattagaagcgcaccatttggtgtatgtagttggt 747

                                                                        
Query: 85   tggtcgatttatcataaggtgaaattagtgagagagcccacaaggccattgcctagcggt 144
            |||||||||||||||||||| |||||||| |||||||| |||| |||||| |||||||||
Sbjct: 748  tggtcgatttatcataaggttaaattagttagagagccaacaaagccattacctagcggt 807

                                                                        
Query: 145  gggaatttgaatttgggggacttgcttaagtacaaatcgcaagaaggggttagagttctg 204
            || ||||| ||||||||||| ||||| ||||||||||| |||||||| ||| ||||| | 
Sbjct: 808  ggaaatttaaatttgggggatttgctaaagtacaaatcacaagaaggcgttcgagtttta 867

                                                                        
Query: 205  atgctggtttgggacgataagacttctcatagcaagttctttatcaatacgtctggagtg 264
             |||| |||||||| ||||| |||||||||||||||||||| || |||||| ||||||||
Sbjct: 868  ttgcttgtttgggatgataaaacttctcatagcaagttcttcattaatacgactggagtg 927

                                                                        
Query: 265  atgcaaacgcatgatgaggaaacgcgcaagtttttcaagcattcttctgttaattgcgtg 324
            ||||||||||||||||| ||||| |||||||| ||||||||||| ||||| ||||| |||
Sbjct: 928  atgcaaacgcatgatgaagaaactcgcaagttcttcaagcattcatctgtgaattgtgtg 987

                                                             
Query: 325  ttatccccgcgttatgccagcagtaagcttagcattttcaagcaacagg 373
            ||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 988  ttatcgccacgttatgccagcagtaagcttagcattttcaagcaacagg 1036


>28725.m000311 phospholipase d beta, putative
          Length = 2571

 Score = 63.9 bits (32), Expect = 7e-10
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                    
Query: 334  cgttatgccagcagtaagcttagcattttcaagcaacagg 373
            |||||||| |||| ||||||||||||||||||||||||||
Sbjct: 1033 cgttatgctagcaataagcttagcattttcaagcaacagg 1072