Jatropha Genome Database
- JcCD0055167.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCD0055167.10 + phase: 0 /partial
(987 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m011013 UDP-glucuronate 5-epimerase, putative 726 0.0
30174.m008860 UDP-glucuronate 5-epimerase, putative 149 4e-35
29783.m000322 UDP-glucuronate 5-epimerase, putative 145 6e-34
29629.m001442 UDP-glucuronate 5-epimerase, putative 141 9e-33
30146.m003476 UDP-glucuronate 5-epimerase, putative 115 5e-25
>30190.m011013 UDP-glucuronate 5-epimerase, putative
Length = 1314
Score = 726 bits (366), Expect = 0.0
Identities = 672/774 (86%)
Strand = Plus / Plus
Query: 186 ttttacccatgttatgcatttagctgctcaagctggggtgcgttatgcaatgcagaatcc 245
|||||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 507 ttttactcatgtaatgcatttagctgctcaagctggtgttcgttatgcaatgcagaatcc 566
Query: 246 aaaatcttatgttcatagtaatattggtgggtttgtcaatttgcttgaagtatgtaaatc 305
||| |||||||| |||||||||||| ||| ||||| ||||| ||||| || ||||||||
Sbjct: 567 aaagtcttatgtcaatagtaatattgctggctttgttaatttacttgaggtttgtaaatc 626
Query: 306 agctaacccacaacctgtagttgtttgggcgtcttctagttcagtttatgggcttaattc 365
||| ||||||||||||| |||||||||||| ||||| |||||||||||||| || ||||
Sbjct: 627 agcaaacccacaacctgcagttgtttgggcttcttcgagttcagtttatggactgaattt 686
Query: 366 gaaagtacccttttcagagaaagataggactgatcagcctgcgagtttatatgcagcaac 425
|| || |||||||||||||| ||||| |||||||||||||| |||||||||||||| ||
Sbjct: 687 caaggtgcccttttcagagaaggatagaactgatcagcctgcaagtttatatgcagctac 746
Query: 426 taagaaagcaggagaggaaattgctcatacttataatcatatttatggtctttcaattac 485
|||||||| |||||||||||||||||| | |||||||||||||||||| | ||||||||
Sbjct: 747 gaagaaagctggagaggaaattgctcattcgtataatcatatttatggtttgtcaattac 806
Query: 486 tgggttaaggttctttactgtttatggtccatggggcagacctgatatggcttatttctt 545
||| |||||||| |||||||||||||| || ||||| || ||||| ||||| ||||||||
Sbjct: 807 tggtttaaggttttttactgtttatggaccttggggaaggcctgacatggcctatttctt 866
Query: 546 ttttaccaaggatattctaaaggggaaggagattggtgtctttgaaactgctgatggaag 605
||| || ||||||||| | |||||||||||||||||| ||||| |||| |||||||||||
Sbjct: 867 tttcactaaggatattttgaaggggaaggagattggtatctttcaaacagctgatggaag 926
Query: 606 aagtgtggctagagattttacttacattgatgatattgttaatggttgtttggcagctct 665
||||| || || |||||||||||||||||||||||||| || || ||||| || ||| |
Sbjct: 927 gagtgtagcaagggattttacttacattgatgatattgtgaaaggctgtttagctgcttt 986
Query: 666 ggatactgcaaagaagagtacaggaagcggagggaagaagagagggccagctcaattcag 725
|||||| || ||||||||||| || || || || ||||||| || | |||||||||||
Sbjct: 987 ggataccgccaagaagagtactgggagtggtggcaagaagaagggtgccgctcaattcag 1046
Query: 726 ggttttcaatttggggaatacttcccctgttcctgtgagtaggcttgttgggattttaga 785
| |||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||| ||
Sbjct: 1047 gctttttaatttggggaatacttcacctgtacctgttagtaggcttgttgggattttgga 1106
Query: 786 gagccttttgcaagttaaagctaagaaaaaagtgttgcctttgcctagaaatggggatgt 845
||| || ||| | || ||||||||||| ||||||||||| ||||| ||||||||||| ||
Sbjct: 1107 gagtctcttgaaggtgaaagctaagaagaaagtgttgccattgccaagaaatggggacgt 1166
Query: 846 ggagtttacacatgctaatattagtttggcacagaaggatctaggatataagcctactac 905
|||||||||||||| ||||||||||| || || | || || ||||||| |||||| ||
Sbjct: 1167 tgagtttacacatgccaatattagttttgcgcaaagagagcttggatataggcctacaac 1226
Query: 906 tgatttggagacggggcttaagaagtttgtgagatggtacctcagttattattc 959
|||||||| || |||||||||||||||||||||||||| |||| | |||||||
Sbjct: 1227 tgatttgggaacagggcttaagaagtttgtgagatggtatctcaatcattattc 1280
>30174.m008860 UDP-glucuronate 5-epimerase, putative
Length = 459
Score = 149 bits (75), Expect = 4e-35
Identities = 270/335 (80%)
Strand = Plus / Plus
Query: 613 gctagagattttacttacattgatgatattgttaatggttgtttggcagctctggatact 672
||||| |||||||| ||||||||||||||||| || |||||||||| ||| ||||||||
Sbjct: 82 gctagggattttacctacattgatgatattgtaaagggttgtttgggtgctttggatact 141
Query: 673 gcaaagaagagtacaggaagcggagggaagaagagagggccagctcaattcagggttttc 732
|| |||||||||| || || ||||||||||||| ||| ||||||||||| |||||||||
Sbjct: 142 gctgagaagagtactggtagtggagggaagaagaaaggaccagctcaattgagggttttc 201
Query: 733 aatttggggaatacttcccctgttcctgtgagtaggcttgttgggattttagagagcctt 792
|| ||||| ||||| || ||||| ||||| ||||| | ||||| || || |||
Sbjct: 202 aacttgggaaatacatctcctgtgcctgtttcagatcttgtcagtattttggaaaggctt 261
Query: 793 ttgcaagttaaagctaagaaaaaagtgttgcctttgcctagaaatggggatgtggagttt 852
||| | || ||||| |||| || | || ||||||| ||||||||||| |||||
Sbjct: 262 ttgaaggtcaaagcaaagaggaatattatgaagctgcctaggaatggggatgttcagttt 321
Query: 853 acacatgctaatattagtttggcacagaaggatctaggatataagcctactactgatttg 912
||||||||||||||||||||||| |||| ||| || || ||||| || ||||| ||||||
Sbjct: 322 acacatgctaatattagtttggcgcagatggaacttgggtataaacccactacagatttg 381
Query: 913 gagacggggcttaagaagtttgtgagatggtacct 947
|||| || || ||||| |||||| | ||||||||
Sbjct: 382 cagacaggcctgaagaaatttgtgcggtggtacct 416
>29783.m000322 UDP-glucuronate 5-epimerase, putative
Length = 1302
Score = 145 bits (73), Expect = 6e-34
Identities = 127/145 (87%)
Strand = Plus / Plus
Query: 400 cagcctgcgagtttatatgcagcaactaagaaagcaggagaggaaattgctcatacttat 459
||||| |||||||||||||| || || || || ||||| |||||||| |||||||||||
Sbjct: 715 cagcccgcgagtttatatgcggctacgaaaaaggcaggtgaggaaatcactcatacttat 774
Query: 460 aatcatatttatggtctttcaattactgggttaaggttctttactgtttatggtccatgg 519
||||||||||| ||||| |||||||||||||| || || |||||||| || |||||||||
Sbjct: 775 aatcatatttacggtctgtcaattactgggttgagattttttactgtctacggtccatgg 834
Query: 520 ggcagacctgatatggcttatttct 544
|| ||||| ||||||||||||||||
Sbjct: 835 ggtagacccgatatggcttatttct 859
>29629.m001442 UDP-glucuronate 5-epimerase, putative
Length = 1206
Score = 141 bits (71), Expect = 9e-33
Identities = 206/251 (82%)
Strand = Plus / Plus
Query: 310 aacccacaacctgtagttgtttgggcgtcttctagttcagtttatgggcttaattcgaaa 369
||||||||||||| | |||| ||||| || || ||||| ||||||||||| || | ||
Sbjct: 499 aacccacaacctgcaattgtgtgggcttcgtcgagttctgtttatgggctgaacactgaa 558
Query: 370 gtacccttttcagagaaagataggactgatcagcctgcgagtttatatgcagcaactaag 429
|||||||||||||| | ||||| || |||||||| || || ||||| ||||| || |||
Sbjct: 559 gtacccttttcagaaatcgatagaacagatcagccagcaagcttatacgcagctacaaag 618
Query: 430 aaagcaggagaggaaattgctcatacttataatcatatttatggtctttcaattactggg 489
||||| || || |||||||| || |||||||| |||||||| |||||||| | ||||||
Sbjct: 619 aaagctggtgaagaaattgcgcacacttataaccatatttacggtctttccctaactggg 678
Query: 490 ttaaggttctttactgtttatggtccatggggcagacctgatatggcttatttctttttt 549
||| | |||||||| || || ||||||||||| ||||| |||||||| ||||| || ||
Sbjct: 679 ttacgattctttacagtgtacggtccatggggaagacccgatatggcatattttttcttc 738
Query: 550 accaaggatat 560
|| ||||||||
Sbjct: 739 actaaggatat 749
>30146.m003476 UDP-glucuronate 5-epimerase, putative
Length = 426
Score = 115 bits (58), Expect = 5e-25
Identities = 151/182 (82%)
Strand = Plus / Plus
Query: 240 gaatccaaaatcttatgttcatagtaatattggtgggtttgtcaatttgcttgaagtatg 299
||||||||| |||||||| |||||||||||| ||| ||||| | ||| ||||| || ||
Sbjct: 174 gaatccaaagtcttatgtcaatagtaatattgttggctttgttagtttacttgaggtttg 233
Query: 300 taaatcagctaacccacaacctgtagttgtttgggcgtcttctagttcagtttatgggct 359
||| |||| ||||||||||||| | |||||||||| ||||| |||||||||||||| |
Sbjct: 234 taattcagtaaacccacaacctgcaattgtttgggcttcttcgagttcagtttatggatt 293
Query: 360 taattcgaaagtacccttttcagagaaagataggactgatcagcctgcgagtttatatgc 419
||| || || |||||||||||||| |||| |||||||| ||||| |||||| ||||
Sbjct: 294 gaatctcaaggtgcccttttcagagaaggataaaactgatcaacctgcaagtttacatgc 353
Query: 420 ag 421
||
Sbjct: 354 ag 355
Score = 58.0 bits (29), Expect = 1e-07
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 493 aggttctttactgtttatggtccatggggcagacctgatatggcttatttcttttttacc 552
||||| |||||||||||||| || ||||| || ||||| ||||| ||||||||||| ||
Sbjct: 354 aggttttttactgtttatggaccttggggaaggcctgacatggcctatttctttttcacg 413
Query: 553 aagga 557
|||||
Sbjct: 414 aagga 418