Jatropha Genome Database
- JcCD0051196.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCD0051196.10 - phase: 0 /pseudo/partial
(929 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30040.m000267 conserved hypothetical protein 806 0.0
30131.m006948 conserved hypothetical protein 52 5e-06
>30040.m000267 conserved hypothetical protein
Length = 3063
Score = 806 bits (405), Expect = 0.0
Identities = 695/791 (87%), Gaps = 10/791 (1%)
Strand = Plus / Plus
Query: 1 caaagtacaaatcttttggacaacatatgggcagaacaacgaagattggaagctctgaag 60
||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1450 caaagtacaaacctgatggacaacatatgggcagaacaacgaagattggaggctctgaag 1509
Query: 61 ttgtattatagggttctggaagcaatgtgcactgcagaggctcagatattgcatgcaact 120
|| |||||||||||| ||||||| |||||||| |||||||| || |||||||||||||||
Sbjct: 1510 ttatattatagggttttggaagctatgtgcacagcagaggcccaaatattgcatgcaact 1569
Query: 121 aatttgacctctttattaactaatgagaggttccacagatgtatgcttgcatgttctgcy 180
||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||
Sbjct: 1570 aatttgacctccttattaactaatgagaggttccacagatgtatgctggcgtgttcggct 1629
Query: 181 gaactagttctggcaacrcataagactgtyacgatgctgtttcctgcagttttkagagag 240
||||||||||||||||| ||||||||||| || ||||||||||| || ||| | ||| |
Sbjct: 1630 gaactagttctggcaacacataagactgtcacaatgctgtttccagctgttctg-gagcg 1688
Query: 241 aactggaatyacagcttttgatcttagcaaggtaatagagagtttcattagacatgagga 300
|||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1689 aactggcataacagctttcgatcttagcaaggtgatagagagtttcattagacatgagga 1748
Query: 301 gtctcttccaagggagctgcggcggcatttgaattcattggaagaacgacttctggagag 360
|||||| || |||||| || | |||||||||||||||||||||||||||||| | |||||
Sbjct: 1749 gtctctgccgagggagttgagacggcatttgaattcattggaagaacgacttttagagag 1808
Query: 361 catggtgtgggaaaagggctcttcaatgtataattctttgaccgttgcaagaccctctct 420
|||||| |||||||||||||| |||||||||||||| || || |||||||| || |||||
Sbjct: 1809 catggtctgggaaaagggctcctcaatgtataattcattaacagttgcaaggccttctct 1868
Query: 421 ttccgcagagataaatcgacttgggctattagcagaaccaatgccatccttggatgcaat 480
|| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1869 ctctgcagagataaatcgtcttgggctattagcagaaccaatgccatctctggatgcaat 1928
Query: 481 tgcgatgcgtattaacttttcttctggtggcttgcctcctatgccttctttacagaagca 540
||| ||| |||||||||||||||||| ||||||||||| | ||||| | ||||||
Sbjct: 1929 tgctgtgcatattaacttttcttctggaggcttgcctccactatcttctgtgtcgaagca 1988
Query: 541 tgagttgtgtc-----cagaatggagatatccggtctccaaaaaaggtcatgcccagatt 595
||| | | || |||||||| |||||| ||||||| |||||| ||||| |||| |
Sbjct: 1989 tgaaatatctcctggtcagaatggggatatcaggtctcc-aaaaagaccatgcacagact 2047
Query: 596 accgtagtgtgttagtagagcggaactcctttacttcaccagtgaaggaccgtctacttg 655
|||| ||||||||||||||||| || ||||| || |||||||||||||| ||||||||||
Sbjct: 2048 accggagtgtgttagtagagcgtaattccttcacatcaccagtgaaggatcgtctacttg 2107
Query: 656 cattcagtaaccttaaatcaaagctaccacca---cctttgcagtctgcctttgccagtc 712
|||||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 2108 cattcactaaccttaaatcaaagctaccaccacctcctttgcaatctgcctttgcaagtc 2167
Query: 713 caacacgtccaaaccccggtggaggaggggaaacatgtgcagaaactgggattaatgtgt 772
| || || |||||||| || ||||||||||||||||||||||||||||| |||||| | |
Sbjct: 2168 cgacgcgcccaaaccctgggggaggaggggaaacatgtgcagaaactggaattaatatat 2227
Query: 773 tctttaccaag 783
|||||| ||||
Sbjct: 2228 tctttagcaag 2238
>30131.m006948 conserved hypothetical protein
Length = 1839
Score = 52.2 bits (26), Expect = 5e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 142 aatgagaggttccacagatgtatgcttgcatgttctgcygaactagtt 189
||||||||||| || ||||| ||||||| |||||||| |||||||||
Sbjct: 499 aatgagaggtttcatagatgcctgcttgcttgttctgctgaactagtt 546