Jatropha Genome Database

JcCB0994661.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0994661.10 + phase: 0 /pseudo/partial/short
         (146 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30189.m001675 Succinyl-CoA ligase [GDP-forming] subunit alpha-2,...    88   2e-17
30189.m001676 Succinyl-CoA ligase [GDP-forming] subunit alpha-2,...    84   2e-16

>30189.m001675 Succinyl-CoA ligase [GDP-forming] subunit alpha-2,
           mitochondrial precursor, putative
          Length = 1005

 Score = 87.7 bits (44), Expect = 2e-17
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                       
Query: 6   gatcctttcaatgggacaaactttgttgattgcattgaaaggttcttggcagatccacag 65
           |||||||||||||| || |||||||||||||||||||||| |||| |||||||||| || 
Sbjct: 655 gatcctttcaatggaacgaactttgttgattgcattgaaaagttcctggcagatcctcaa 714

                   
Query: 66  acagaagg 73
           ||||||||
Sbjct: 715 acagaagg 722


>30189.m001676 Succinyl-CoA ligase [GDP-forming] subunit alpha-2,
           mitochondrial precursor, putative
          Length = 1005

 Score = 83.8 bits (42), Expect = 2e-16
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                       
Query: 6   gatcctttcaatgggacaaactttgttgattgcattgaaaggttcttggcagatccacag 65
           |||||||||||||| || |||||||||||||||||||||| |||  |||||||||| || 
Sbjct: 655 gatcctttcaatggaacgaactttgttgattgcattgaaaagtttctggcagatcctcaa 714

                     
Query: 66  acagaaggta 75
           ||||||||||
Sbjct: 715 acagaaggta 724