Jatropha Genome Database
- JcCB0982161.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0982161.10 + phase: 0 /partial
(405 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014220 nucleic acid binding protein, putative 367 e-101
29983.m003121 nucleic acid binding protein, putative 90 1e-17
29794.m003304 nucleic acid binding protein, putative 76 2e-13
29643.m000323 nucleic acid binding protein, putative 76 2e-13
29883.m001956 nucleic acid binding protein, putative 74 7e-13
30078.m002347 nucleic acid binding protein, putative 72 3e-12
28694.m000662 nucleic acid binding protein, putative 58 4e-08
29647.m001996 nucleic acid binding protein, putative 54 7e-07
30128.m008805 nucleic acid binding protein, putative 54 7e-07
>30170.m014220 nucleic acid binding protein, putative
Length = 1509
Score = 367 bits (185), Expect = e-101
Identities = 344/397 (86%)
Strand = Plus / Plus
Query: 2 cagatccagatgctgaagtgatagctttatcgccaaagactctattagccacaaatcgtt 61
|||||||||||||||||||||| |||||||| ||||| || || |||||||| || | |
Sbjct: 143 cagatccagatgctgaagtgattgctttatcaccaaaaacactgttagccacgaacaggt 202
Query: 62 ttgtgtgcgagatctgcaacaaaggcttccaacgggaccagaacctccaacttcaccgcc 121
| ||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| |
Sbjct: 203 tcgtgtgtgagatctgcaacaaaggctttcaacgggaccagaacctccagcttcaccgtc 262
Query: 122 gcggacataatttaccgtggaagctaaagcagcgaaccagtaaggaaccacgcaagcggg 181
| || ||||| ||||| ||||| |||||||||||||| ||||| || ||| ||| | |
Sbjct: 263 gaggtcataacttaccatggaaactaaagcagcgaactagtaaagagccaataaagagag 322
Query: 182 tctacgtttgcccagaaaaatcttgtgttcaccataatccagctagagctctgggcgacc 241
||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||
Sbjct: 323 tctacgtttgcccagaagcatcttgtgttcatcataatccagctagagctctcggtgact 382
Query: 242 tcaccggaatcaagaagcacttttgcaggaagcacggggagaagaagtggaagtgtgagc 301
| || || |||||||| ||||| ||||| ||||| || || ||||| |||||||||||
Sbjct: 383 tgactggcatcaagaaacacttctgcagaaagcatggagaaaagaaatggaagtgtgaaa 442
Query: 302 ggtgctcgaagaaatatgcagtacaatccgattggaaggcccacatgaaaacttgtggaa 361
||||||| ||||||||||||||||| || |||||||| ||||||||||| |||||||| |
Sbjct: 443 ggtgctcaaagaaatatgcagtacagtcagattggaaagcccacatgaagacttgtggca 502
Query: 362 ctagagagtataaatgcgattgcggcactttgttctc 398
|||||||||||||||| ||||| ||||||||||||||
Sbjct: 503 ctagagagtataaatgtgattgtggcactttgttctc 539
>29983.m003121 nucleic acid binding protein, putative
Length = 1314
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/157 (82%)
Strand = Plus / Plus
Query: 224 ctagagctctgggcgacctcaccggaatcaagaagcacttttgcaggaagcacggggaga 283
|||||||||| || ||||| || ||||| ||||||||||||||||| ||||| || ||||
Sbjct: 179 ctagagctctcggagacctaactggaataaagaagcacttttgcagaaagcatggtgaga 238
Query: 284 agaagtggaagtgtgagcggtgctcgaagaaatatgcagtacaatccgattggaaggccc 343
|||| |||||||| ||| || || |||| |||||| || || || |||||||| || |
Sbjct: 239 agaaatggaagtgcgagaaatgttcaaagagatatgccgtgcagtcagattggaaagcac 298
Query: 344 acatgaaaacttgtggaactagagagtataaatgcga 380
|| ||||| ||||| ||||||||||| ||||||||
Sbjct: 299 actccaaaacctgtgggactagagagtacaaatgcga 335
>29794.m003304 nucleic acid binding protein, putative
Length = 1341
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 238 gacctcaccggaatcaagaagcacttttgcaggaagcacggggagaagaagtggaagtgt 297
||||| || ||||||||||||||||||||||| ||||| || |||||||||||||| |||
Sbjct: 250 gaccttacaggaatcaagaagcacttttgcagaaagcatggtgagaagaagtggaaatgt 309
Query: 298 ga 299
||
Sbjct: 310 ga 311
>29643.m000323 nucleic acid binding protein, putative
Length = 1632
Score = 75.8 bits (38), Expect = 2e-13
Identities = 110/134 (82%)
Strand = Plus / Plus
Query: 205 tgtgttcaccataatccagctagagctctgggcgacctcaccggaatcaagaagcacttt 264
||||| |||||| ||||| | |||||| | || ||||| || ||||| |||||||| |||
Sbjct: 334 tgtgtacaccatgatccatcaagagctttaggtgacctgacaggaataaagaagcatttt 393
Query: 265 tgcaggaagcacggggagaagaagtggaagtgtgagcggtgctcgaagaaatatgcagta 324
|||| || || || || |||||||||||||||||| || || ||||||||||||||
Sbjct: 394 agcagaaaacatggagaaaagaagtggaagtgtgagaaatgttcaaagaaatatgcagtt 453
Query: 325 caatccgattggaa 338
||||| ||||||||
Sbjct: 454 caatcagattggaa 467
>29883.m001956 nucleic acid binding protein, putative
Length = 1401
Score = 73.8 bits (37), Expect = 7e-13
Identities = 136/169 (80%)
Strand = Plus / Plus
Query: 205 tgtgttcaccataatccagctagagctctgggcgacctcaccggaatcaagaagcacttt 264
|||||||||||| |||| | |||||||| || ||||| || || |||||||| |||| |
Sbjct: 376 tgtgttcaccatcatccctcaagagctctcggtgaccttacaggtatcaagaaacactat 435
Query: 265 tgcaggaagcacggggagaagaagtggaagtgtgagcggtgctcgaagaaatatgcagta 324
||||| || || || || ||||| ||||||||||| ||||| |||| ||||| ||
Sbjct: 436 tgcagaaaacatggagaaaagaaatggaagtgtgaaaaatgctcaaagatctatgctgtt 495
Query: 325 caatccgattggaaggcccacatgaaaacttgtggaactagagagtata 373
||||| ||||||||||| || ||||| |||||||||||||||||||
Sbjct: 496 caatctgattggaaggctcattctaaaacctgtggaactagagagtata 544
>30078.m002347 nucleic acid binding protein, putative
Length = 1578
Score = 71.9 bits (36), Expect = 3e-12
Identities = 123/152 (80%)
Strand = Plus / Plus
Query: 226 agagctctgggcgacctcaccggaatcaagaagcacttttgcaggaagcacggggagaag 285
|||||||| || || |||||||| || || ||||||||| || |||| || || |||||
Sbjct: 373 agagctctcggagatctcaccgggataaaaaagcactttagccggaaacatggagagaaa 432
Query: 286 aagtggaagtgtgagcggtgctcgaagaaatatgcagtacaatccgattggaaggcccac 345
|| |||||||||||| || || |||||||||||||| ||||| || ||||| || |||
Sbjct: 433 aaatggaagtgtgagaaatgttcaaagaaatatgcagttcaatcagactggaaagctcac 492
Query: 346 atgaaaacttgtggaactagagagtataaatg 377
|| |||||||| |||||||| ||||||||
Sbjct: 493 tccaagacttgtggcactagagaatataaatg 524
>28694.m000662 nucleic acid binding protein, putative
Length = 1659
Score = 58.0 bits (29), Expect = 4e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 2 cagatccagatgctgaagtgatagctttatcgccaaagactctattagccacaaatcgtt 61
|||| |||||||| |||||||||||| |||| ||||||||| | | || |||||| | |
Sbjct: 200 cagacccagatgcagaagtgatagctctatcaccaaagactttgatggcaacaaatagat 259
Query: 62 ttgtgtgcgagatctgcaacaaagg 86
|||| || |||||||| ||||||||
Sbjct: 260 ttgtatgtgagatctgtaacaaagg 284
Score = 58.0 bits (29), Expect = 4e-08
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 238 gacctcaccggaatcaagaagcacttttgcaggaagcacggggagaagaagtggaagtgt 297
||||| || |||||||| || |||||| |||| ||||| || |||||||||||||| |||
Sbjct: 439 gacctgacaggaatcaaaaaacactttagcagaaagcatggcgagaagaagtggaaatgt 498
Query: 298 gagcggtgctcgaagaaatatgcagtacaatccgattggaa 338
|| |||||| || | |||||||| ||||| ||||||||
Sbjct: 499 gataagtgctcaaaaaggtatgcagttcaatcagattggaa 539
>29647.m001996 nucleic acid binding protein, putative
Length = 1896
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 280 gagaagaagtggaagtgtgagcggtgctcgaagaaatatgcagtacaatccgattggaa 338
|||||||| ||||| ||||| |||||| |||||||||||||| ||||| ||||||||
Sbjct: 559 gagaagaaatggaaatgtgataagtgctccaagaaatatgcagttcaatctgattggaa 617
>30128.m008805 nucleic acid binding protein, putative
Length = 1542
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 304 tgctcgaagaaatatgcagtacaatccgattggaa 338
||||| |||||||||||||||||||| ||||||||
Sbjct: 535 tgctcaaagaaatatgcagtacaatctgattggaa 569