Jatropha Genome Database

JcCB0979461.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0979461.10 - phase: 2 /partial
         (370 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29801.m003175 conserved hypothetical protein                          274   3e-73

>29801.m003175 conserved hypothetical protein
          Length = 1434

 Score =  274 bits (138), Expect = 3e-73
 Identities = 288/338 (85%)
 Strand = Plus / Plus

                                                                        
Query: 32   cttcagggagaaattgctggggctcagcgattacacaaatcaaaggttcttaagaagcta 91
            |||| |||||||| |||||||||| || |  |||| ||||||| | |||| |||||| | 
Sbjct: 1078 cttccgggagaaactgctggggctaagaggctacagaaatcaaggattctgaagaagttg 1137

                                                                        
Query: 92   ctcaaagaacaagacgcagctggaagaatatatggagcggtttgctcttcccctgcagtt 151
            |||||||||||||| ||||||||||||||||||||||| ||||||||||||  | |||||
Sbjct: 1138 ctcaaagaacaagatgcagctggaagaatatatggagcagtttgctcttccatttcagtt 1197

                                                                        
Query: 152  ctacataatcagggtttattgaaggataagaaagccactgcacatccttctgttgagaat 211
            ||||| | ||| ||| ||||||||||||| ||||||||||||||||||||| ||  ||  
Sbjct: 1198 ctacagagtcaaggtctattgaaggataaaaaagccactgcacatccttctttttcgagc 1257

                                                                        
Query: 212  cagctaagtaacaatgtaataaatgacgccaaagtagttattgatggtaaagtgatcact 271
            |||||||  ||  | ||| || |||  || ||||||||||||||||||||| ||||||| 
Sbjct: 1258 cagctaaccaatgaagtagtagatggtgctaaagtagttattgatggtaaactgatcacc 1317

                                                                        
Query: 272  agcaaggggcatgctacagtaacagattttgcaatggctatagtgagcaagctttttggc 331
            |||||||| | |||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 1318 agcaagggacttgctactgtcacagattttgcaatggctattgtgagcaagctttttggc 1377

                                                  
Query: 332  catgcaagggcgaggagtgtagctgagggccttgtttt 369
             | |||||||| ||||| ||||| || |||||||||||
Sbjct: 1378 gaagcaagggcaaggagcgtagcggaaggccttgtttt 1415