Jatropha Genome Database

JcCB0971961.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0971961.10 - phase: 0 
         (417 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29579.m000199 NADH-ubiquinone oxidoreductase, putative                153   1e-36

>29579.m000199 NADH-ubiquinone oxidoreductase, putative
          Length = 2235

 Score =  153 bits (77), Expect = 1e-36
 Identities = 185/221 (83%)
 Strand = Plus / Plus

                                                                       
Query: 187 cacttccccaaccccgatgatgcgatcgaggtctttgtcgatgggtatccggtcaaaatc 246
           |||||||| ||||| || |||||||| || || ||||| ||||| |||||||| ||||||
Sbjct: 193 cacttcccgaacccggaggatgcgattgaagtatttgtggatggatatccggttaaaatc 252

                                                                       
Query: 247 cctaaaggaatgacggttttgcaagcttgtgaagtcgctggtgttgacattcctcgattt 306
           || ||||| |||||||| || ||||| |||||||| || ||||| ||||||||| |||| 
Sbjct: 253 ccaaaagggatgacggtgttacaagcgtgtgaagtagcaggtgtagacattcctagattc 312

                                                                       
Query: 307 tgctatcatagccgactttccattgctggtaactgccgtatgtgccttgttgaggtcgag 366
           || || || ||  |||| || ||||||||||||||||||||||| |||||||| || |||
Sbjct: 313 tgttaccacagtagactctctattgctggtaactgccgtatgtgtcttgttgaagttgag 372

                                                    
Query: 367 aagtctccaaagcccgttgcttcttgcgctatgcctgctct 407
           || ||||| || || || |||||||| |||||||| |||||
Sbjct: 373 aaatctcctaaacctgtcgcttcttgtgctatgcccgctct 413