Jatropha Genome Database

JcCB0971801.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0971801.10 + phase: 0 /partial
         (302 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29841.m002859 GTP binding protein, putative                           190   3e-48

>29841.m002859 GTP binding protein, putative
          Length = 621

 Score =  190 bits (96), Expect = 3e-48
 Identities = 210/248 (84%)
 Strand = Plus / Plus

                                                                       
Query: 22  tgggaagggtatttaggagaaagatcagacggtcagaaaccgatcttcagcgtaagaaga 81
           |||||||| |||||||||||||||||||| || ||||||||  ||||||| ||| |||| 
Sbjct: 250 tgggaaggctatttaggagaaagatcagagggccagaaaccagtcttcagtgtacgaagg 309

                                                                       
Query: 82  tcatcgatgatcggacggtgtagcgttgctgtagaagtgtatggcaatccaggagaggag 141
           ||||| || ||||||||||| ||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 310 tcatcaataatcggacggtgcagcgtagctgtagaagtgtatggtaatccaggggaggag 369

                                                                       
Query: 142 taccagatagaaggttcctttgctaacaggtgttgcacgatcttcaatacagtaaaggaa 201
           || ||||||||||| || ||||| || || | ||||||  | || ||| |||| || |||
Sbjct: 370 tatcagatagaagggtcatttgcgaatagatcttgcacattttttaatgcagtcaaagaa 429

                                                                       
Query: 202 tcagtggctgagattagacgcaaagtcgatgcttctacaaacgttgtgctcggtaaggac 261
           |||||||||||||| ||||||||||| ||| | |||||  ||||||| || ||||| |||
Sbjct: 430 tcagtggctgagatcagacgcaaagtagatacctctactcacgttgtacttggtaaagac 489

                   
Query: 262 gtcttctc 269
           || |||||
Sbjct: 490 gtattctc 497