Jatropha Genome Database
- JcCB0969631.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0969631.10 + phase: 1 /partial
(216 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004649 Cellulose synthase A catalytic subunit 6 [UDP-form... 100 6e-21
29863.m001055 Cellulose synthase A catalytic subunit 6 [UDP-form... 94 4e-19
29637.m000754 Cellulose synthase A catalytic subunit 6 [UDP-form... 88 2e-17
28093.m000117 Cellulose synthase A catalytic subunit 6 [UDP-form... 78 2e-14
30026.m001452 wd40 protein, putative 64 4e-10
29482.m000171 Cellulose synthase A catalytic subunit 3 [UDP-form... 52 1e-06
>29848.m004649 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3252
Score = 99.6 bits (50), Expect = 6e-21
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 123 cctgcatctttgcttaaagaagccatccatgttattagctgtggctatgaagataaaaca 182
||||||||| | || ||||||||||||||||||||||||||||| |||||||| || ||
Sbjct: 2239 cctgcatctcttctaaaagaagccatccatgttattagctgtggatatgaagacaagact 2298
Query: 183 gaatggggtaaagaggttggatggatttatggtt 216
|||||||| |||||| | |||||||| |||||||
Sbjct: 2299 gaatggggcaaagagatcggatggatctatggtt 2332
>29863.m001055 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3288
Score = 93.7 bits (47), Expect = 4e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 138 aaagaagccatccatgttattagctgtggctatgaagataaaacagaatggggtaaagag 197
|||||||| || ||||| || ||||||||||||||||||||| | |||||||| ||||||
Sbjct: 2296 aaagaagcaattcatgtcatcagctgtggctatgaagataaatccgaatgggggaaagag 2355
Query: 198 gttggatggatttatggtt 216
||||| |||||||||||||
Sbjct: 2356 gttgggtggatttatggtt 2374
>29637.m000754 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3135
Score = 87.7 bits (44), Expect = 2e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 141 gaagccatccatgttattagctgtggctatgaagataaaacagaatggggtaaagaggtt 200
||||| |||||||||||||| ||||| |||||||| || || |||||||| |||||||||
Sbjct: 2146 gaagctatccatgttattagttgtggatatgaagagaagactgaatggggaaaagaggtt 2205
Query: 201 ggatggatttatggtt 216
|||||||| |||||||
Sbjct: 2206 ggatggatctatggtt 2221
>28093.m000117 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 2487
Score = 77.8 bits (39), Expect = 2e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 140 agaagccatccatgttattagctgtggctatgaagataaaacagaatggggtaaagaggt 199
|||||||||||| ||||| |||||||| |||||||||||||| |||||||| || || ||
Sbjct: 1497 agaagccatccaggttatcagctgtgggtatgaagataaaacggaatggggaaaggaagt 1556
Query: 200 tggatggatttatgg 214
||| ||||| |||||
Sbjct: 1557 tggctggatatatgg 1571
>30026.m001452 wd40 protein, putative
Length = 4377
Score = 63.9 bits (32), Expect = 4e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 153 gttattagctgtggctatgaagataaaacagaatggggtaaagaggttggatggatttat 212
||||||||||| |||||||||| ||||| |||||||| |||||| |||| ||||| |||
Sbjct: 3391 gttattagctgcagctatgaagagaaaactgaatggggaaaagagattggttggatatat 3450
Query: 213 ggtt 216
||||
Sbjct: 3451 ggtt 3454
>29482.m000171 Cellulose synthase A catalytic subunit 3 [UDP-forming],
putative
Length = 2934
Score = 52.0 bits (26), Expect = 1e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 123 cctgcatctttgcttaaagaagccatccatgttattagctgtggctatga 172
|||||| || ||||||||||||||||||| || || || |||||||||||
Sbjct: 1924 cctgcagctctgcttaaagaagccatccacgtcatcagttgtggctatga 1973