Jatropha Genome Database

JcCB0960711.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0960711.10 - phase: 0 /pseudo
         (624 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29842.m003541 similarity to receptor protein kinase, putative         155   4e-37

>29842.m003541 similarity to receptor protein kinase, putative
          Length = 1824

 Score =  155 bits (78), Expect = 4e-37
 Identities = 228/278 (82%)
 Strand = Plus / Plus

                                                                       
Query: 205 aaccaagacagcatcctagtggataccagacttaatatacccttctcgtgcgactgctta 264
           ||||||||||||||||| | || ||||||| | ||  |||||||||| ||||||||||||
Sbjct: 196 aaccaagacagcatcctcgcgggtaccagaatcaacgtacccttctcctgcgactgctta 255

                                                                       
Query: 265 aatggcgatttcttgggccacaccttcaagtacaccacgcagcccggcgatacttatgat 324
           ||||||||||||||||| || |||||||  ||||| || ||  | || |||||||| |||
Sbjct: 256 aatggcgatttcttgggtcataccttcatttacacgacacaaactggtgatacttacgat 315

                                                                       
Query: 325 aggattgcaaaatatgcttttgcaaacctcacaacagaggattgggttcacagagtcaac 384
           |  || |||||   |||||||||||| |||||||| |||||||||||||| ||||| |||
Sbjct: 316 aaaatcgcaaatattgcttttgcaaatctcacaactgaggattgggttcatagagtaaac 375

                                                                       
Query: 385 atttataaaactacaaggattcctgactatgttcctatcaacgttactgttaattgctcc 444
           |||||| | ||||| ||||| || ||| ||| |||||| || || ||  | ||||| || 
Sbjct: 376 atttatgacactaccaggataccggacgatgctcctattaatgtcaccctcaattgttct 435

                                                 
Query: 445 tgtggagataaacgtgtgtccaaggattacggcttgtt 482
           || |||||||| || ||||| ||| |||| ||||||||
Sbjct: 436 tgcggagataagcgcgtgtcgaagaattatggcttgtt 473