Jatropha Genome Database

JcCB0942771.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0942771.10 + phase: 0 /pseudo/partial
         (179 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28327.m000358 Chorismate synthase, chloroplast precursor, putative    163   4e-40

>28327.m000358 Chorismate synthase, chloroplast precursor, putative
          Length = 1308

 Score =  163 bits (82), Expect = 4e-40
 Identities = 112/122 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagtacggtgtcagagcagtgaagggtggaggtagatcttcagcaagggaaaccatt 60
           |||||||| ||||||||| ||||| ||||||| || |||||||||||||| || ||||||
Sbjct: 478 atgaagtatggtgtcagatcagtgcagggtgggggaagatcttcagcaagagagaccatt 537

                                                                       
Query: 61  ggaagagttgcaccaggagctattgcgaagaaaattctcaagcaattttcaggaactgag 120
           ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 538 ggaagggttgcatcaggagctattgcaaagaaaattctcaagcaattttcaggaactgag 597

             
Query: 121 gt 122
           ||
Sbjct: 598 gt 599