Jatropha Genome Database

JcCB0905621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0905621.10 + phase: 2 /pseudo/partial
         (536 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29932.m000622 catalytic, putative                                     167   8e-41

>29932.m000622 catalytic, putative
          Length = 762

 Score =  167 bits (84), Expect = 8e-41
 Identities = 156/180 (86%)
 Strand = Plus / Plus

                                                                       
Query: 71  aggattgtcactgagaaagctgtatttgcaatgccagaagcttctataggacttttccct 130
           |||||||| |||||||||||||||||||| ||||||||||| || |||||||||||||| 
Sbjct: 70  aggattgtaactgagaaagctgtatttgcgatgccagaagcatccataggacttttccca 129

                                                                       
Query: 131 gatctaggggcatcacattttctttccaggattccaggatattttggggaatatttagga 190
           ||| | ||||| || ||||||||||| ||| | || ||| ||||||| |||||||| |||
Sbjct: 130 gatgttggggcttctcattttctttctaggctccctggacattttggagaatatttggga 189

                                                                       
Query: 191 ctgactggagcaagagttgatggagcagaaatgcttgcttgtggtttggcaacacatttt 250
           || |||||||||||| |  ||||||||||||||||||| ||||| ||||| ||| |||||
Sbjct: 190 cttactggagcaagactaaatggagcagaaatgcttgcctgtggcttggccacaaatttt 249



 Score = 81.8 bits (41), Expect = 4e-15
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 379 taacagattggagattattaacaaatgtttctcaaaagatacagtcgaagagatctt 435
           |||||||||||||||  || ||||||||||||||||||||||||||||||| |||||
Sbjct: 378 taacagattggagatggttgacaaatgtttctcaaaagatacagtcgaagaaatctt 434