Jatropha Genome Database

JcCB0902911.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0902911.10 - phase: 1 /partial
         (303 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29610.m000406 adenylosuccinate lyase, putative                        289   5e-78

>29610.m000406 adenylosuccinate lyase, putative
          Length = 1422

 Score =  289 bits (146), Expect = 5e-78
 Identities = 200/218 (91%)
 Strand = Plus / Plus

                                                                       
Query: 7   aggttaaatggctgctgaagctttcacaaattgctgaagtcattgaggtccccaacttta 66
           ||||||||||| |||||||||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 134 aggttaaatggttgctgaagctttcacaaattcctgaagtcactgaggttcccaacttta 193

                                                                       
Query: 67  gtgaagaagctcagtctttcttgcaaggattgattgatgggtttagcttggatgatgcct 126
           |||| |||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 194 gtgatgaagctcagtcttatttgcaaggattgattgatgggtttagcatggatgacgcct 253

                                                                       
Query: 127 tggaggttaagaacattgagaaagtgacgaatcatgacgtaaaagcagtggaatacttct 186
           ||||||| || || ||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 254 tggaggtgaaaaatattgagaaagtgacgaaccatgacgtaaaagcagtggagtacttct 313

                                                 
Query: 187 tgaaaaagaaatgccaatctcacccagagattgctaag 224
           ||||||||||||||||||| ||  |||||||| |||||
Sbjct: 314 tgaaaaagaaatgccaatcacattcagagatttctaag 351



 Score =  101 bits (51), Expect = 2e-21
 Identities = 73/79 (92%), Gaps = 1/79 (1%)
 Strand = Plus / Plus

                                                                       
Query: 225 tctgaggatatcaacaatctggcccatgcattaatgctgaaaagagtcaatgaacaaggt 284
           |||||||||||||||||||||||||||||||| |||||| ||||| |||||||| |||||
Sbjct: 382 tctgaggatatcaacaatctggcccatgcattgatgctg-aaagaatcaatgaataaggt 440

                              
Query: 285 tatgtttcctgtaatggat 303
           ||| ||||||| |||||||
Sbjct: 441 tatttttcctgcaatggat 459