Jatropha Genome Database

JcCB0902641.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0902641.10 - phase: 0 /pseudo/partial
         (312 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001431 GTP binding protein, putative                           105   2e-22

>29830.m001431 GTP binding protein, putative
          Length = 2340

 Score =  105 bits (53), Expect = 2e-22
 Identities = 143/173 (82%)
 Strand = Plus / Plus

                                                                        
Query: 5    aggatcttcaagatgcattggctcatcgtgataaagagctcgctgagagagatgcagcac 64
            |||||||||| |||||||||||  || ||||||||||  | || || |||||||||||  
Sbjct: 1517 aggatcttcaggatgcattggccgattgtgataaagaagttgcagaaagagatgcagcta 1576

                                                                        
Query: 65   tgaacaattccaagaagcagattaagagcatagaaataaaacttgattctgccaatgctc 124
            | | | |  ||||| |||||||||| |  ||||||| |||| |||||||||| |||||||
Sbjct: 1577 ttatcgaggccaagcagcagattaacaatatagaaaaaaaaattgattctgcaaatgctc 1636

                                                                 
Query: 125  gccaccaattagagaaagaagcatgggaaaccaaccttcagaacttggaagaa 177
            |||||||||||||||||||||||  |||||  || ||||| || |||||||||
Sbjct: 1637 gccaccaattagagaaagaagcactggaaataaatcttcaaaatttggaagaa 1689