Jatropha Genome Database
- JcCB0902161.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0902161.10 + phase: 0 /partial
(280 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30138.m003939 mads box protein, putative 361 1e-99
30174.m009079 mads box protein, putative 74 5e-13
29790.m000814 mads box protein, putative 56 1e-07
>30138.m003939 mads box protein, putative
Length = 735
Score = 361 bits (182), Expect = 1e-99
Identities = 254/278 (91%)
Strand = Plus / Plus
Query: 1 atggaaaggatccttgaacgttatgagagatactcatatgcagagaggcagcttgttgca 60
||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||
Sbjct: 187 atggaaaggatccttgaacgttacgagagatattcatatgcagagaggcagcttcttgca 246
Query: 61 actgacactgaaacaaatggtagctggactctggaacatgcaaagctgaaggctagggtt 120
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 247 actgatactgaaacaaatggtagctggactctagaacatgcaaagctgaaggctagggtg 306
Query: 121 gaggttttacaaagaaaccaaaggcacttcatgggggaagatcttgattctttaagtctc 180
|||||||||||||||||||||||||| |||||||||||||| |||||| | |||| |||
Sbjct: 307 gaggttttacaaagaaaccaaaggcatttcatgggggaagaacttgataccttaaccctc 366
Query: 181 aaagaacttcaaaatttggagcaacagatcgattctgctcttaagcacataagatcaaga 240
||||| ||||| |||||||||||||| || |||||||||||||| ||| | || ||||||
Sbjct: 367 aaagaccttcagaatttggagcaacaaattgattctgctcttaaacacgttaggtcaaga 426
Query: 241 aagaaccaacagatgtatgaatccatttcagaactcca 278
||||| |||| |||||| ||||| ||||||||||||||
Sbjct: 427 aagaatcaactgatgtacgaatcaatttcagaactcca 464
>30174.m009079 mads box protein, putative
Length = 543
Score = 73.8 bits (37), Expect = 5e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1 atggaaaggatccttgaacgttatgagagatactcatatgcagagaggcagcttgttgca 60
||||||||||| |||||||| || ||||| || ||||||||||| ||||||||||| |||
Sbjct: 1 atggaaaggattcttgaacgctacgagaggtattcatatgcagaaaggcagcttgtagca 60
Query: 61 actga 65
|||||
Sbjct: 61 actga 65
Score = 60.0 bits (30), Expect = 7e-09
Identities = 93/114 (81%)
Strand = Plus / Plus
Query: 117 ggttgaggttttacaaagaaaccaaaggcacttcatgggggaagatcttgattctttaag 176
||||||| |||||||||||||||| ||||| | |||| |||||||| || ||||| |
Sbjct: 117 ggttgagcttttacaaagaaaccataggcattatttgggagaagatctagactctttgac 176
Query: 177 tctcaaagaacttcaaaatttggagcaacagatcgattctgctcttaagcacat 230
|| ||||| || || || |||||||||||| | ||| ||||||| ||||||||
Sbjct: 177 cctgaaagagctacagaacttggagcaacagcttgatactgctctaaagcacat 230
>29790.m000814 mads box protein, putative
Length = 567
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 199 gagcaacagatcgattctgctcttaagcacataagatcaagaaagaaccaac 250
||||||||||| ||| |||||||||||| | | ||||||||||||||||||
Sbjct: 199 gagcaacagattgatactgctcttaagcgcgtgcgatcaagaaagaaccaac 250