Jatropha Genome Database
- JcCB0902031.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0902031.10 + phase: 0 /partial
(669 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014229 ubiquitin-protein ligase, putative 716 0.0
>30170.m014229 ubiquitin-protein ligase, putative
Length = 2442
Score = 716 bits (361), Expect = 0.0
Identities = 583/657 (88%)
Strand = Plus / Plus
Query: 13 tgggattcaagttatgaccctggtagccagtcggaggacagttatcagtttgagagacag 72
|||||||||||||||||||| || |||||||| |||||||||||||| |||||||||
Sbjct: 13 tgggattcaagttatgaccccggcagccagtcagaggacagttatcattttgagagattt 72
Query: 73 tatatagaacctatttatgatacatttgtttgcccattgacaaagcaagtcatgcgcgat 132
|||||||||||||||||||| |||||||||| || || ||||| ||||||||||| |||
Sbjct: 73 catatagaacctatttatgatgcatttgtttgtcctttaacaaaacaagtcatgcgtgat 132
Query: 133 cctgtgaccttggaaaatgggcaaacatttgaacgtgaagcaatagaaaagtggtttaac 192
||||||||||| |||||||||||||| |||||||| ||||||||||||| ||||||||
Sbjct: 133 cctgtgaccttagaaaatgggcaaacttttgaacgagaagcaatagaaaggtggtttaga 192
Query: 193 gaatgcagggacagtgggaagaaattaacttgccccttgacacaaaaagaactaaaaagt 252
||||||||||| ||||| | ||||| |||||| ||||| ||||||||| |||||| |
Sbjct: 193 gaatgcagggagagtggcagaaaattggtttgccctttgactcaaaaagaattaaaaact 252
Query: 253 actgaactaaaccctagcatagctttgcggaacaccattgaagagtggactgctaggaat 312
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gcagaactaaaccctagcatagctttgcggaacaccattgaagagtggactgctaggaat 312
Query: 313 gaagctgttcagctagatatggctcggaggtcattaaatctgactaatcctgaaagtgat 372
|||||||||||||| ||||||||||||||||||||||||||||| | ||| |||| |||
Sbjct: 313 gaagctgttcagctggatatggctcggaggtcattaaatctgaccagtccggaaaatgag 372
Query: 373 gttttgcaatctttgaagtatgttcagtatatctgccagaagagcagatcaaataagcat 432
||| | || |||||||||||||| |||||||||||||| || ||| ||||||||||||||
Sbjct: 373 gttcttcagtctttgaagtatgtccagtatatctgccaaaaaagccgatcaaataagcat 432
Query: 433 gttgtgcgcaatgctgagttgatacctatgattgttgacatgttaaagagtagcagccgc 492
||||||||||||||||| |||||||||||||| |||||| |||| ||||||||||||||
Sbjct: 433 gttgtgcgcaatgctgaattgatacctatgatcgttgacgtgttgaagagtagcagccgt 492
Query: 493 cgagttcggtgtaaagcattagaaactcttaaaactgtgatagaggaagatgtcgataat 552
|||||||||||||||| | ||||| ||| ||||||| |||||||||||| |||||||
Sbjct: 493 agagttcggtgtaaagctctggaaacacttcaaactgttgtagaggaagatgccgataat 552
Query: 553 aaggcaatattggcggaaggtgacactgtgcgaacaatagttaagttattgtcacatgag 612
|||||||||||||| || ||||||| |||||| || |||||||||| ||||| ||||||
Sbjct: 553 aaggcaatattggctgagggtgacattgtgcgtactgtagttaagttcttgtctcatgag 612
Query: 613 caatccaaagaaagggaggaagctgtctcattgctgcatgagctctctaaatctgaa 669
||||||||||| |||||||||||||| || || ||||||||||||| |||||||||
Sbjct: 613 caatccaaagagagggaggaagctgtgtcgttattgcatgagctctcaaaatctgaa 669