Jatropha Genome Database
- JcCB0897541.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0897541.10 + phase: 2 /pseudo/partial
(1272 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29900.m001612 ketol-acid reductoisomerase, chloroplast precursor... 1374 0.0
29646.m001077 ketol-acid reductoisomerase, chloroplast precursor... 688 0.0
>29900.m001612 ketol-acid reductoisomerase, chloroplast precursor,
putative
Length = 1785
Score = 1374 bits (693), Expect = 0.0
Identities = 1124/1272 (88%), Gaps = 17/1272 (1%)
Strand = Plus / Plus
Query: 1 tgttgcctgatgctttcaaggggattaagcagattggagttnttggctggggatcccagg 60
|||||||||||||||| || ||||||||||||||||| || ||||||||||||| ||||
Sbjct: 341 tgttgcctgatgcttttaaagggattaagcagattggtgtcattggctggggatctcagg 400
Query: 61 ggccagcccaagcacagaatttgagggattctcttgctgatgcaaactctgacatcgtag 120
||||||| ||||| |||||||||||||||||||||||||||||||| ||||| || || |
Sbjct: 401 ggccagctcaagctcagaatttgagggattctcttgctgatgcaaaatctgatattgttg 460
Query: 121 taaagccgttttgctattgcagattgggttgaggaagggctcccgctcttttgctgaagc 180
||||| |||||| ||||||||||||||||||||||||| |||||
Sbjct: 461 taaag-----------------attgggctgaggaagggctcccgctcttttgccgaagc 503
Query: 181 tcgtgctgcggggttcactgaagagagtggaacattgggagacatttgggaaactattgc 240
||||||||| ||||||||||| |||| ||||| ||||| ||||| |||||||| |||||
Sbjct: 504 tcgtgctgcagggttcactgaggagaacggaactttgggggacatatgggaaaccattgc 563
Query: 241 tggcagtgatcttgtcttgttattgatttctgatgctgctcaggcagataactatgagaa 300
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 564 tggcagtgatcttgtcttgttattgatttctgatgctgcacaggcagataacaatgaaaa 623
Query: 301 gatattctctcatatgaaaccaaacagcatccttggcctttcccatggttttcttcttgg 360
||||||||| || ||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 624 gatattctcccacatgaaaccaaacagcatccttgggctttcccatggttttcttctggg 683
Query: 361 acatttgcaatcactggggcttgattttcctaagaacataagtgttattgctgtttgtcc 420
|||||| ||||| |||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 684 acatttacaatctttggggcttgactttcctaagaacataagtgttattgctgtttgccc 743
Query: 421 caagggaatggggccttctgttcgtaggctctatgttcagggcaaagaaataaatggtgc 480
|||||| |||||||||||||| | ||||| ||||||||||| |||||||||||||| ||
Sbjct: 744 caaggggatggggccttctgtaaggaggctttatgttcagggaaaagaaataaatggagc 803
Query: 481 aggaattaattcaagttttgctgtccaccaggatgttgatggtagagctgcagatgttgc 540
||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 804 cggaattaattccagttttgctgtccaccaggatgttgatggtagagctacagatgttgc 863
Query: 541 cttgggatggtctgttgctttgggctctccttttacatttgccaccacattggagcagga 600
|||||||||||| |||||| |||| ||||| |||||||||||||||||| ||||||||||
Sbjct: 864 cttgggatggtcagttgctctggggtctccatttacatttgccaccacactggagcagga 923
Query: 601 gtacaagagtgacattttcggggaacgtggcatactacttggcgctgtccatggggttgt 660
||| | |||||||||||| ||||| ||||||||||||||||| ||||| ||||| |||||
Sbjct: 924 gtataggagtgacatttttggggagcgtggcatactacttggtgctgttcatggagttgt 983
Query: 661 ggaatgcttgttcagaaggtacactgagaatggaatgaatgaagatgtggcttacaagaa 720
|| ||||| ||||||||||||||||||| |||||||| ||||||| | |||||||||||
Sbjct: 984 tgagtgcttattcagaaggtacactgagagtggaatgagtgaagatttagcttacaagaa 1043
Query: 721 taccgttgagagcataacaggaataatatcaaaaactatctcaacaaagggcatgttggc 780
||| ||||| |||| |||||||| |||||||||| || ||||| ||||||||||||||
Sbjct: 1044 tactgttgaatgcattacaggaattgtatcaaaaaccatttcaactaagggcatgttggc 1103
Query: 781 tgtttataactcattatccgatgagggaaaaagggactttgagactgcatacagtgcagc 840
|||||| || |||| || || ||||| ||||||||||||||||||||||| ||||| |
Sbjct: 1104 tgtttacaatgcattgtcagaagagggcaaaagggactttgagactgcatatagtgcttc 1163
Query: 841 gtattatccctgtatggacattctatatgagtgttatgaagatgttgctagtggtagtga 900
|| ||||| || |||||||| || |||||||||||||| || |||||||||||||||||
Sbjct: 1164 ctactatccttgcatggacatcctttatgagtgttatgaggacgttgctagtggtagtga 1223
Query: 901 gattcgaagtgttgtgttggctgggcgtcgattctatgaaaaggagggcctaccagcttt 960
|||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 1224 gattagaagtgttgttttggctgggcgtcgattctatgaaaaagagggtttaccagcttt 1283
Query: 961 cccaatgggtaagatagatcaaacgcgaatgtggaaagtgggtgaacgtgttcgagcaac 1020
||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 1284 cccgatgggtaagattgatcaaacacgaatgtggaaagtgggtgagcgtgttcgagcagt 1343
Query: 1021 acgacctaaggatgacttgggtcctttatatcctttcactgctggagtatttgtagcatt 1080
| |||| || | ||||||||||||||| ||||| |||||||||||||| ||||||||| |
Sbjct: 1344 aagacccaatggtgacttgggtcctttgtatcccttcactgctggagtgtttgtagcact 1403
Query: 1081 gatgatggctcagatcgaggtgttgcggaagaagggacactcgtactctgaaatcataaa 1140
|||||||||||||| ||||| ||| |||||||||| |||||||| ||||| ||||| ||
Sbjct: 1404 aatgatggctcagattgaggtcttgaggaagaaggggcactcgtattctgagatcatcaa 1463
Query: 1141 tgagagtttgattgaagctgtggattcactaaatccattcatgcatgcccgaggtgtctc 1200
|||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 1464 tgagagtttgattgaagctgtggattcactgaatccgttcatgcatgctagaggtgtctc 1523
Query: 1201 attcatggttgataattgttcgacaactgctcgattaggatcaaggaagtgggcacctcg 1260
|||||||||||||| ||||| || ||||| |||||||||||||| || ||||| || ||
Sbjct: 1524 gttcatggttgataactgttcaaccactgcccgattaggatcaagaaaatgggcgccacg 1583
Query: 1261 ttttgattacat 1272
|||||||||||
Sbjct: 1584 ctttgattacat 1595
>29646.m001077 ketol-acid reductoisomerase, chloroplast precursor,
putative
Length = 1755
Score = 688 bits (347), Expect = 0.0
Identities = 923/1115 (82%)
Strand = Plus / Plus
Query: 152 aggaagggctcccgctcttttgctgaagctcgtgctgcggggttcactgaagagagtgga 211
|||||||| || || || ||||||||||||||| |||| || || |||||||||| |||
Sbjct: 445 aggaagggatctcgttcatttgctgaagctcgttctgctggttttactgaagagaatggg 504
Query: 212 acattgggagacatttgggaaactattgctggcagtgatcttgtcttgttattgatttct 271
|| ||||| ||||||||||||||| || |||||||||||||||| | ||||||| |||
Sbjct: 505 actttgggtgacatttgggaaactgtttctggcagtgatcttgtactcctattgatatct 564
Query: 272 gatgctgctcaggcagataactatgagaagatattctctcatatgaaaccaaacagcatc 331
|||||||| ||||| ||||| |||||||| | ||||| |||||||| |||||||||||
Sbjct: 565 gatgctgcgcaggctgataattatgagaaagtgttctcccatatgaagccaaacagcata 624
Query: 332 cttggcctttcccatggttttcttcttggacatttgcaatcactggggcttgattttcct 391
||||| ||||||||||| |||||||||||||||||||| ||| |||| || || || ||
Sbjct: 625 cttggtctttcccatggatttcttcttggacatttgcagtcaatgggactcgacttccca 684
Query: 392 aagaacataagtgttattgctgtttgtcccaagggaatggggccttctgttcgtaggctc 451
||||| || |||||||||||||| ||||||||||||||||| || ||||| | || ||
Sbjct: 685 aagaatattagtgttattgctgtgtgtcccaagggaatgggtccatctgtgaggagactt 744
Query: 452 tatgttcagggcaaagaaataaatggtgcaggaattaattcaagttttgctgtccaccag 511
|||||||| |||||||| ||||||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 745 tatgttcaaggcaaagagataaatggtgctggaataaattctagttttgcagtccaccag 804
Query: 512 gatgttgatggtagagctgcagatgttgccttgggatggtctgttgctttgggctctcct 571
||||||||||||||||| |||||||||||||||||||||| ||||| | || ||||||
Sbjct: 805 gatgttgatggtagagccacagatgttgccttgggatggtcggttgcccttggttctcct 864
Query: 572 tttacatttgccaccacattggagcaggagtacaagagtgacattttcggggaacgtggc 631
|| || |||||||| ||| | || |||||||||||||||||||| || || || || |||
Sbjct: 865 ttcacttttgccactacactagaacaggagtacaagagtgacatctttggagagcgcggc 924
Query: 632 atactacttggcgctgtccatggggttgtggaatgcttgttcagaaggtacactgagaat 691
|| ||||||||||||| ||||| | || || | || || ||| | |||||||| ||
Sbjct: 925 attttacttggcgctgttcatggaatcgtagagtctttatttagacgatacactgaaaac 984
Query: 692 ggaatgaatgaagatgtggcttacaagaataccgttgagagcataacaggaataatatca 751
||||||| |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||
Sbjct: 985 ggaatgagtgaagatgaggcttacaagaatactgttgagtgcataacaggaattatatca 1044
Query: 752 aaaactatctcaacaaagggcatgttggctgtttataactcattatccgatgagggaaaa 811
|| || |||||||| |||||||||||||||| || || || || || || || || |||
Sbjct: 1045 aagaccatctcaacccagggcatgttggctgtatacaattccttgtctgaagaaggcaaa 1104
Query: 812 agggactttgagactgcatacagtgcagcgtattatccctgtatggacattctatatgag 871
| | |||||||||||||||||||| |||||||||| || |||||||| | ||||||
Sbjct: 1105 aaacagtttgagactgcatacagtgcctcgtattatccttgcatggacatcttgtatgag 1164
Query: 872 tgttatgaagatgttgctagtggtagtgagattcgaagtgttgtgttggctgggcgtcga 931
|| ||||| ||||| ||| ||||||||||||| || |||||||| ||||||||||||||
Sbjct: 1165 tgctatgaggatgtagcttgtggtagtgagatccgcagtgttgtcttggctgggcgtcgc 1224
Query: 932 ttctatgaaaaggagggcctaccagctttcccaatgggtaagatagatcaaacgcgaatg 991
|| ||||||| ||| || | |||||||||||||||||||| || || || || || |||
Sbjct: 1225 ttttatgaaagggatggtttgccagctttcccaatgggtaaaattgaccagacacgcatg 1284
Query: 992 tggaaagtgggtgaacgtgttcgagcaacacgacctaaggatgacttgggtcctttatat 1051
||||| || ||||| || |||||| |||| || || | ||||| ||||||||| ||
Sbjct: 1285 tggaaggttggtgagcgagttcgatcaactcgggctgcaggggacttaggtcctttagat 1344
Query: 1052 cctttcactgctggagtatttgtagcattgatgatggctcagatcgaggtgttgcggaag 1111
||||||||||||||||| | ||| ||| | |||||||||||||| || | ||| | |||
Sbjct: 1345 cctttcactgctggagtctatgtggcactaatgatggctcagattgaaatcttgagaaag 1404
Query: 1112 aagggacactcgtactctgaaatcataaatgagagtttgattgaagctgtggattcacta 1171
|| || ||||| |||||||| ||||| ||||||||| |||| || | |||||||| |
Sbjct: 1405 aaagggcactcctactctgagatcattaatgagagtgtgatcgagtcggtggattctttg 1464
Query: 1172 aatccattcatgcatgcccgaggtgtctcattcatggttgataattgttcgacaactgct 1231
|||||||| |||||||| || || || || || |||||||| || || |||||||| ||
Sbjct: 1465 aatccatttatgcatgctcgtggggtttcttttatggttgacaactgctcgacaacagca 1524
Query: 1232 cgattaggatcaaggaagtgggcacctcgttttga 1266
|||| |||||||| || ||||| |||||||||||
Sbjct: 1525 agattgggatcaagaaaatgggctcctcgttttga 1559