Jatropha Genome Database

JcCB0892281.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0892281.10 - phase: 0 /pseudo/partial
         (240 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29593.m000174 conserved hypothetical protein                          176   4e-44

>29593.m000174 conserved hypothetical protein
          Length = 1503

 Score =  176 bits (89), Expect = 4e-44
 Identities = 143/161 (88%)
 Strand = Plus / Plus

                                                                        
Query: 10   agttgcaagtatggtgccacatgccgctacaatcatcctgataggaatgcaatcaatcca 69
            ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 961  agttgtaagtatggtgccacttgccgctataatcatcctgataggaatgcaatcaatcca 1020

                                                                        
Query: 70   cctgctgctgctataagtcatcccattgtagccaatcctgctgctaatttgaacattgga 129
            ||||||||||| ||| | |||||| || | |||  |||||| |||||| ||||| |||||
Sbjct: 1021 cctgctgctgcaataggccatccccttcttgcctctcctgcagctaatctgaaccttgga 1080

                                                     
Query: 130  gttattaatccagctgcctctttatatcaaactattgatcc 170
            | ||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 1081 gatattaatccagctgcctctatatatcaagctatttatcc 1121