Jatropha Genome Database

JcCB0891141.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0891141.10 - phase: 1 /partial
         (251 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29598.m000461 Auxin-induced protein 22D, putative                     218   1e-56
29883.m001992 Auxin-induced protein 22E, putative                     115   1e-25
29841.m002748 Auxin-induced protein AUX22, putative                    78   3e-14
30146.m003546 Auxin-responsive protein IAA27, putative                 60   6e-09

>29598.m000461 Auxin-induced protein 22D, putative
          Length = 603

 Score =  218 bits (110), Expect = 1e-56
 Identities = 190/217 (87%), Gaps = 6/217 (2%)
 Strand = Plus / Plus

                                                                       
Query: 25  ccaaggcacaagttgtagggtggccacctatcagatcttaccggaaaaactgtttccaag 84
           ||||||||||||| || || ||||||||  ||||||||||||||||||||||||| || |
Sbjct: 215 ccaaggcacaagtggttggatggccaccagtcagatcttaccggaaaaactgttttcagg 274

                                                                       
Query: 85  caaagaaaatggaggctgagggttctgga------atttacgttaaagttagcatggatg 138
           ||| |||||  |||||||||| | |||||      |||||||||||||||||||||||||
Sbjct: 275 caaggaaaacagaggctgaggctgctggaaatggaatttacgttaaagttagcatggatg 334

                                                                       
Query: 139 gtgctccttatcttagaaagattgatttgaagctctacaaagattactcagagcttctta 198
           ||||||||||||||||||||||||| |||||| ||||||||  |||| |||||||| || 
Sbjct: 335 gtgctccttatcttagaaagattgacttgaaggtctacaaatgttacacagagctttttc 394

                                                
Query: 199 aagctttagaagacatgttcaagttcgaagttggtaa 235
           |||||||||| ||||||||||||||| ||||||||||
Sbjct: 395 aagctttagaggacatgttcaagttcaaagttggtaa 431


>29883.m001992 Auxin-induced protein 22E, putative
          Length = 591

 Score =  115 bits (58), Expect = 1e-25
 Identities = 124/146 (84%)
 Strand = Plus / Plus

                                                                       
Query: 19  ctcctgccaaggcacaagttgtagggtggccacctatcagatcttaccggaaaaactgtt 78
           ||||||||||||||||||| || |||||||| || |||||||||||| ||||||| | ||
Sbjct: 206 ctcctgccaaggcacaagtagtggggtggccgccaatcagatcttacaggaaaaattatt 265

                                                                       
Query: 79  tccaagcaaagaaaatggaggctgagggttctggaatttacgttaaagttagcatggatg 138
           ||||| | ||| |||  |||| ||||||| |||| || ||||||||||| ||  ||||||
Sbjct: 266 tccaaacgaagcaaagtgagggtgagggtgctggtatgtacgttaaagtgagtgtggatg 325

                                     
Query: 139 gtgctccttatcttagaaagattgat 164
           | ||||| ||||| ||||||||||||
Sbjct: 326 gagctccgtatctaagaaagattgat 351


>29841.m002748 Auxin-induced protein AUX22, putative
          Length = 585

 Score = 77.8 bits (39), Expect = 3e-14
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                          
Query: 117 tacgttaaagttagcatggatggtgctccttatcttagaaagattga 163
           ||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 259 tacgtgaaagttagcatggatggtgctccttttcttagaaagattga 305


>30146.m003546 Auxin-responsive protein IAA27, putative
          Length = 1122

 Score = 60.0 bits (30), Expect = 6e-09
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 14  tgctcctcctgccaaggcacaagttgtagggtggccacctat 55
           ||||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 636 tgctcctgctgcaaaggcacaagtggtagggtggccacctat 677