Jatropha Genome Database

JcCB0868471.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0868471.10 - phase: 0 /partial
         (312 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

58083.m000075 ATP synthase 9 mitochondrial, putative                  309   5e-84
51845.m000009 ATP synthase 9 mitochondrial, putative                  264   3e-70
52479.m000014 ATP synthase, putative                                   64   5e-10

>58083.m000075 ATP synthase 9 mitochondrial, putative
          Length = 306

 Score =  309 bits (156), Expect = 5e-84
 Identities = 198/212 (93%)
 Strand = Plus / Plus

                                                                       
Query: 91  atgttagaaggtgctaaattaatcggtgcgggagcagctacaatcgctttggcgggagca 150
           ||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||| 
Sbjct: 1   atgttagaaggtgctaaatcaatcggtgcgggagctgctacaatagctttggcgggagct 60

                                                                       
Query: 151 gctgtcgggattggttctgtcttcagttctttgatacattccgtggctagaaatccatcc 210
           |||||||| |||||   |||||||||||||||||| |||||||||||  |||||||||||
Sbjct: 61  gctgtcggtattggaaatgtcttcagttctttgatccattccgtggcgcgaaatccatcc 120

                                                                       
Query: 211 ttagctaaacaattatttggttatgcaattttgggatttgctctaaccgaagctattgca 270
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 121 ttagctaaacaattatttggttatgccattttgggatttgctctaaccgaagctattgca 180

                                           
Query: 271 ttgtttgccttaatgatggcctttttgatctt 302
           | |||||||||||||||||||||| |||||||
Sbjct: 181 tcgtttgccttaatgatggcctttctgatctt 212


>51845.m000009 ATP synthase 9 mitochondrial, putative
          Length = 182

 Score =  264 bits (133), Expect = 3e-70
 Identities = 169/181 (93%)
 Strand = Plus / Plus

                                                                       
Query: 91  atgttagaaggtgctaaattaatcggtgcgggagcagctacaatcgctttggcgggagca 150
           ||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||| 
Sbjct: 1   atgttagaaggtgctaaatcaatcggtgcgggagctgctacaatagctttggcgggagct 60

                                                                       
Query: 151 gctgtcgggattggttctgtcttcagttctttgatacattccgtggctagaaatccatcc 210
           |||||||| |||||   |||||||||||||||||| |||||||||||  |||||||||||
Sbjct: 61  gctgtcggtattggaaatgtcttcagttctttgatccattccgtggcgcgaaatccatcc 120

                                                                       
Query: 211 ttagctaaacaattatttggttatgcaattttgggatttgctctaaccgaagctattgca 270
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 121 ttagctaaacaattatttggttatgccattttgggatttgctctaaccgaagctattgca 180

            
Query: 271 t 271
           |
Sbjct: 181 t 181


>52479.m000014 ATP synthase, putative
          Length = 1089

 Score = 63.9 bits (32), Expect = 5e-10
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                        
Query: 1    gaaagaaagatagaaccagatgcattcttaaaagaaagcgcttt 44
            ||||||||||| ||||||||||| ||||||||||||| ||||||
Sbjct: 1033 gaaagaaagatggaaccagatgctttcttaaaagaaaacgcttt 1076