Jatropha Genome Database

JcCB0858421.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0858421.10 - phase: 0 
         (237 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006605 Cycloartenol synthase, putative                         161   2e-39
27446.m000471 Cycloartenol synthase, putative                          68   2e-11

>30169.m006605 Cycloartenol synthase, putative
          Length = 2235

 Score =  161 bits (81), Expect = 2e-39
 Identities = 144/165 (87%)
 Strand = Plus / Plus

                                                                       
Query: 37  ccatacttatacagcactaacaactacgtaggaaggcaaatatgggagttcgatcctgat 96
           ||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 40  ccatatttgtacagcacaaacaactacgtagggaggcaaatatgggagttcgatcctgat 99

                                                                       
Query: 97  gcagggactcctgaggagcgtgctgcggtggaacaagttcgtcaaaatttctacaacaac 156
           ||||| ||||| |||||||| |||  ||| ||| ||| |||||    |||  ||||||| 
Sbjct: 100 gcaggcactcccgaggagcgcgctcaggtagaagaagctcgtcgtgtttttcacaacaat 159

                                                        
Query: 157 cggcatcaggtcaagcccagcagtgaccttctctggcgtatgcag 201
           || |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 160 cgtcatcaggtgaagcccagcagtgaccttctctggcgtatgcag 204


>27446.m000471 Cycloartenol synthase, putative
          Length = 1234

 Score = 67.9 bits (34), Expect = 2e-11
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                       
Query: 65  taggaaggcaaatatgggagttcgatcctgatgcagggactcctgaggagcgtgctgcgg 124
           |||||||||||||||||||||| |||||| ||||||| || ||||| ||||  |||| ||
Sbjct: 65  taggaaggcaaatatgggagtttgatcctaatgcaggcacacctgaagagctggctgagg 124

                                 
Query: 125 tggaacaagttcgtcaaaattt 146
           | ||||||| ||| ||| ||||
Sbjct: 125 ttgaacaagctcgccaatattt 146